RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IQCKQ8N0W5 287 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF740Q8NDX6 193 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CCL4L1Q8NHW4 92 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 FAM172AQ8WUF8 416 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 RXFP2Q8WXD0 754 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CNN2Q99439 309 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NRIP2Q9BQI9 281 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 SLC7A5P2Q9GIP4 190 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 POLR2J2Q9GZM3 115 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ILKAPQ9H0C8 392 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ING2Q9H160 280 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 POLR2J3Q9H1A7 115 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NARFLQ9H6Q4 476 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 EXO5Q9H790 373 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 SLC25A22Q9H936 323 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NMRAL1Q9HBL8 299 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ACP6Q9NPH0 428 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 AGPAT4Q9NRZ5 378 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 BFARQ9NZS9 450 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ADAM22Q9P0K1 906 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 SLC17A4Q9Y2C5 497 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 KCNIP3Q9Y2W7 256 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CHTOPQ9Y3Y2 248 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PEX16Q9Y5Y5 336 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 MRPS18BQ9Y676 258 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 SETXQ7Z333 2677 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TDRD6O60522 2096 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 FASNP49327 2511 aaKnown RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF462Q96JM2 2506 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 FLNBO75369 2602 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 DSPP15924 2871 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 GTF3C1Q12789 2109 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PPIAL4EA0A075B759 164 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 ARPC4-TTLL3A0A0A6YYG9 625 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 NSG1A0A0A6YYJ2 146 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 A0A0G2JLM5 398 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 A8MUA0 341 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PDZK1P1A8MUH7 402 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 DFFAO00273 331 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 WBP4O75554 376 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 ACTL6AO96019 429 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CALB1P05937 261 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PABPC4LP0CB38 370 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PPIAL4FP0DN26 164 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF30P17039 623 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 TEAD1P28347 426 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 HTR1EP28566 365 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CD1BP29016 333 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PRDX3P30048 256 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 HSPA9P38646 679 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 GLP1RP43220 463 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 YAP1P46937 504 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 GPM6AP51674 278 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 SH3BGRP55822 239 aaPredicted RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 SCRN3Q0VDG4 424 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CYTH1Q15438 398 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 NSDHLQ15738 373 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF630Q2M218 657 aaPredicted RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PYCR3Q53H96 274 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CTRB2Q6GPI1 263 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 DCUN1D2Q6PH85 259 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 RNF165Q6ZSG1 346 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 SLC25A48Q6ZT89 311 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 SLC26A11Q86WA9 606 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 TGIF2LXQ8IUE1 241 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PSTKQ8IV42 348 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 NUDCD3Q8IVD9 361 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 FAM71AQ8IYT1 594 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 UMODL1-AS1Q8N2C9 162 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 ZADH2Q8N4Q0 377 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 TPRX1Q8N7U7 411 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 LINC01555Q8NAE3 123 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 BBOF1Q8ND07 529 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 OR52K1Q8NGK4 314 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 SLC37A2Q8TED4 501 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PATE1Q8WXA2 126 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 DCUN1D4Q92564 292 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 NTAN1Q96AB6 310 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 C9orf72Q96LT7 481 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CHRDL1Q9BU40 450 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 PPA2Q9H2U2 334 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 FANCEQ9HB96 536 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 LHX9Q9NQ69 397 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 MMP26Q9NRE1 261 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 GIN1Q9NXP7 522 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 CLCF1Q9UBD9 225 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 FARSAQ9Y285 508 aaKnown RBP2.75□□□□□ -1.97
PTCH1-216ENST00000548379 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 DOCK6Q96HP0 2047 aa2.75□□□□□ -1.97
PTCH1-216ENST00000548379 A0A1B0GUH1 482 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 BTBD17A6NE02 478 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 C9J4A7 227 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 K7EM74 188 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ABCD4O14678 606 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 AGPAT2O15120 278 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms