RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 GRPP07492 148 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 CPT2P23786 658 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 PRDX6P30041 224 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 PSMB10P40306 273 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 DGCR6Q14129 220 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SEC23BQ15437 767 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 METTL11BQ5VVY1 283 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 CD276Q5ZPR3 534 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 CFAP77Q6ZQR2 320 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 ZNF826PQ6ZT77 177 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 FGFRL1Q8N441 504 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 LNX2Q8N448 690 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 FAM86B1Q8N7N1 296 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 OR52J3Q8NH60 311 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SSMEM1Q8WWF3 244 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 C7orf34Q96L11 122 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 ERMAPQ96PL5 475 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 COQ7Q99807 217 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 TRIM15Q9C019 465 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 NDEL1Q9GZM8 345 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 HDHD2Q9H0R4 259 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SEMA6AQ9H2E6 1030 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SMURF1Q9HCE7 757 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 NRIP3Q9NQ35 241 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 VSX1Q9NZR4 365 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 RNF7Q9UBF6 113 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 B9D1Q9UPM9 204 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SAMD4AQ9UPU9 718 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 AURKCQ9UQB9 309 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 SIGLEC7Q9Y286 467 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 V9GYQ6 96 aa9.9□□□□□ -0.82
TRAFD1-205ENST00000548277 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 IGHV1-69DA0A0B4J2H0 117 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 UNC119BA6NIH7 251 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 J3QW42 95 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 ATP8B1O43520 1251 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 SNX3O60493 162 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 IGHV1-69P01742 117 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 HLA-DQA2P01906 255 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 ACSM4P0C7M7 580 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 MMP9P14780 707 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 OMPP47874 163 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 RPS6KA3P51812 740 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 RAD23AP54725 363 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 BPIFB3P59826 476 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 MALLQ13021 153 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 KRT72Q14CN4 511 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 PDCD1Q15116 288 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 KCNMB1Q16558 191 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 OCLNQ16625 522 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 GPR139Q6DWJ6 353 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 PGAP1Q75T13 922 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 BTN2A1Q7KYR7 527 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 MRPL21Q7Z2W9 205 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 CPLX4Q7Z7G2 160 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 OR2AJ1Q8NGZ0 328 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 DYRK2Q92630 601 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 RSRC1Q96IZ7 334 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 FN3KQ9H479 309 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 C1orf123Q9NWV4 160 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 POMT1Q9Y6A1 747 aa9.89□□□□□ -0.83
TRAFD1-205ENST00000548277 hCG_1807616A0A1W2PRN6 198 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 GGT3PA6NGU5 568 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 SLC22A31A6NKX4 558 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 A6NLC8 198 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 LGALS8O00214 317 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 OR10H3O60404 316 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 PRB2P02812 416 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 CRABP1P29762 137 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 MSX2P35548 267 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 GGT2P36268 569 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 CD200P41217 278 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 GATA4P43694 442 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 IER3P46695 156 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 NPY4RP50391 375 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 DLX1P56177 255 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 PROK1P58294 105 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 FXYD6P3P58550 94 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 HIST1H3AP68431 136 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 ELF3P78545 371 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 HIST2H3PS2Q5TEC6 136 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 DNM1P34Q6PK57 102 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 COLCA1Q6ZS62 124 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 Q6ZSV7 163 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 HIST2H3AQ71DI3 136 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 PNLDC1Q8NA58 520 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 OR4K13Q8NH42 304 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 OR2AE1Q8NHA4 323 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 ST8SIA4Q92187 359 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 PYURFQ96I23 114 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 NMNAT3Q96T66 252 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 SIRPDQ9H106 197 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 GORASP2Q9H8Y8 452 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 RPRD1BQ9NQG5 326 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 VWFP04275 2813 aa9.88□□□□□ -0.83
TRAFD1-205ENST00000548277 IGLV1-36A0A0B4J1U3 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms