RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NKIRAS1Q9NYS0 192 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 SLC17A7Q9P2U7 560 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 MRM2Q9UI43 246 aaKnown RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 ERBINQ96RT1 1412 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 TDRD15B5MCY1 1934 aaKnown RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 CACNA1GO43497 2377 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 ARHGEF10O15013 1369 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 FRMPD3Q5JV73 1810 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 KIR2DL5BA0A0G2JN68 375 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 KIR2DL5BA0A0G2JPC4 375 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 A0A1B0GVI7 797 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF726A6NNF4 738 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 GOLGA8RI6L899 631 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 K7EMT4 169 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 GALR3O60755 368 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 SCN2BO60939 215 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 AQP8O94778 261 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 VENTXO95231 258 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 LDOC1O95751 146 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 HPRT1P00492 218 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 GCGP01275 180 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 TACSTD2P09758 323 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 OR8U9P0C7N5 309 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 GGT1P19440 569 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 RAB5AP20339 215 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CSNK1DP48730 415 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 DSCR10P59022 87 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 TAS2R19P59542 299 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 IRX3P78415 501 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CXCL6P80162 114 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 UNC119Q13432 240 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CCNJQ5T5M9 372 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF658Q5TYW1 1059 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF613Q6PF04 617 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 WDR82Q6UXN9 313 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 C12orf54Q6X4T0 127 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 TMEM179Q6ZVK1 233 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 MBOAT2Q6ZWT7 520 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 BHLHA15Q7RTS1 189 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 MRPL55Q7Z7F7 128 aaKnown RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 OAFQ86UD1 273 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 NELFCDQ8IXH7 590 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 KIR2DL5AQ8N109 375 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 WDR31Q8NA23 367 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 OR8U1Q8NH10 309 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 KIR2DL5BQ8NHK3 375 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CASKIN1Q8WXD9 1431 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 TNFRSF14Q92956 283 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 C18orf12Q96KH6 178 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 GPR21Q99679 349 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 UPF3BQ9BZI7 483 aaKnown RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 Q9H3A6 140 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 SRMSQ9H3Y6 488 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 RPF2Q9H7B2 306 aaKnown RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 SLC39A1Q9NY26 324 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 EURLQ9NYK6 297 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CD274Q9NZQ7 290 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 VAPAQ9P0L0 249 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CLEC2DQ9UHP7 191 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 NXT1Q9UKK6 140 aaKnown RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF256Q9Y2P7 627 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A15Q9Y619 301 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 CCNB3Q8WWL7 1395 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 RGPD5Q99666 1765 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 DLEC1Q9Y238 1755 aa3.23□□□□□ -1.89
SCAF11-210ENST00000547654 MYO3BQ8WXR4 1341 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 DOT1LQ8TEK3 1739 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 KDM6AO15550 1401 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 NAIPQ13075 1403 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 A6NDN8 102 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 EPM2AB3EWF7 344 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 F8VZ95 297 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 H7C2Y5 167 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 DFFAO00273 331 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 GABRPO00591 440 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 TOR1AO14656 332 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF780AO75290 641 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ALOX12BO75342 701 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ZMPSTE24O75844 475 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SEMG1P04279 462 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 OCMP0CE72 109 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 GKN3PP0CG01 181 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 NEFHP12036 1026 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 FOLR1P15328 257 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PGAM1P18669 254 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 F2RP25116 425 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 GPX4P36969 197 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 OR3A4PP47883 348 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SERPINB8P50452 374 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PAFAH1B2P68402 229 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 IRX1P78414 480 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PRR4Q16378 134 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 TAL2Q16559 108 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PRR30Q53SZ7 412 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PTRHD1Q6GMV3 140 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms