RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 HIST3H3Q16695 136 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 RSPO1Q2MKA7 263 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 AWAT2Q6E213 333 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 LAMTOR1Q6IAA8 161 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 BAIAP2L2Q6UXY1 529 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 CHMP1BQ7LBR1 199 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 ANGPTL5Q86XS5 388 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 ZNF101Q8IZC7 436 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 BATF2Q8N1L9 274 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 GALNT16Q8N428 558 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 PAQR4Q8N4S7 273 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 IL22RA1Q8N6P7 574 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 SGCZQ96LD1 299 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 GINS4Q9BRT9 223 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 SLC6A15Q9H2J7 730 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 PRR14LQ5THK1 2151 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 SPAARA0A1B0GVQ0 90 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 FAM172BPA6NC97 362 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 HSPB2A8KAH6 182 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 DHHO43323 396 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 TLX3O43711 291 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 PEX14O75381 377 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 HPP00738 406 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 HCKP08631 526 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 TRAPPC2P0DI81 140 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 TRAPPC2BP0DI82 140 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 DYRK1AQ13627 763 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 HSPB2Q16082 182 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 CLPPQ16740 277 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 SNAI3Q3KNW1 292 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 CD163Q86VB7 1156 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 ASCC1Q8N9N2 400 aaKnown RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 PGAM5Q96HS1 289 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 LYZL4Q96KX0 146 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 METTL17Q9H7H0 456 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 A0A087WZY1 265 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 C7orf66A4D0T2 115 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 H7C417 338 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 NEURL1O76050 574 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 ISG15P05161 165 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 VSIG10L2P0DP72 767 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 MSR1P21757 451 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 MAGEA5P43359 124 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 C2orf68Q2NKX9 166 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 SCGB2B2Q4G0G5 96 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 ZNF774Q6NX45 483 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 TMPRSS7Q7RTY8 843 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 C1QL2Q7Z5L3 287 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 TMED4Q7Z7H5 227 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 ADGRE4PQ86SQ3 457 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 VASH2Q86V25 355 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 TCTE3Q8IZS6 198 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 OR6M1Q8NGM8 313 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 C17orf50Q8WW18 174 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 NABP1Q96AH0 204 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 SPRY4Q9C004 299 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 MTFP1Q9UDX5 166 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 SMG1Q96Q15 3661 aaKnown RBP9.75□□□□□ -0.85
CUX1-212ENST00000547394 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 ZNF93P35789 620 aaPredicted RBP9.75□□□□□ -0.85
CUX1-212ENST00000547394 CSNK2A1P68400 391 aaPredicted RBP9.75□□□□□ -0.85
CUX1-212ENST00000547394 HGFACQ04756 655 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 FOXO1Q12778 655 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 CSRP2Q16527 193 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 DCAF10Q5QP82 559 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 TMEM164Q5U3C3 297 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 FGD2Q7Z6J4 655 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 ADPRHL1Q8NDY3 354 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 DEDD2Q8WXF8 326 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 PIGTQ969N2 578 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 GPER1Q99527 375 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 SELENOIQ9C0D9 397 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 KLK13Q9UKR3 277 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 MGAT4AQ9UM21 535 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 RHBDD3Q9Y3P4 386 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 CSAG2Q9Y5P2 127 aa9.75□□□□□ -0.85
CUX1-212ENST00000547394 IGKV1-9A0A0C4DH69 117 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 MPIG6BO95866 241 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 RAB3AP20336 220 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 SRD5A2P31213 254 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 FOXG1P55316 489 aaPredicted RBP9.74□□□□□ -0.85
CUX1-212ENST00000547394 ABHD17BQ5VST6 288 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 DEGS2Q6QHC5 323 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 OR5AS1Q8N127 324 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 DEFB124Q8NES8 71 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 TMEM41AQ96HV5 264 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 NELFAQ9H3P2 528 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 ZFP64Q9NPA5 681 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 TMEM138Q9NPI0 162 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 FLVCR1Q9Y5Y0 555 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 A0A096LPE4 126 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 A0A1W2PPZ6 126 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 EIF1BO60739 113 aaKnown RBP9.74□□□□□ -0.85
CUX1-212ENST00000547394 C1QBP02746 253 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 CYC1P08574 325 aa9.74□□□□□ -0.85
CUX1-212ENST00000547394 CCL2P13500 99 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms