RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LYNP07948 512 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 MSMBP08118 114 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 ANPEPP15144 967 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 SLC2A5P22732 501 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 PTGES3Q15185 160 aaKnown RBP13.43□□□□□ -0.26
DDX54-204ENST00000546898 CR1LQ2VPA4 569 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 LCN1P1Q5VSP4 162 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 KDM4DQ6B0I6 523 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 OTOSQ8NHW6 89 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 SPRYD4Q8WW59 207 aaPredicted RBP13.43□□□□□ -0.26
DDX54-204ENST00000546898 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 MEGF10Q96KG7 1140 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 GAL3ST1Q99999 423 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 TMEM100Q9NV29 134 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 WNK2Q9Y3S1 2297 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 ISPDA4D126 451 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 IGHV2-70P01814 119 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 CX3CR1P49238 355 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 MMP16P51512 607 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 RPS7P62081 194 aaKnown RBP13.42□□□□□ -0.26
DDX54-204ENST00000546898 ZNF92Q03936 586 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 GLYATL3Q5SZD4 288 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 SLX4IPQ5VYV7 408 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 SPATC1Q76KD6 591 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 CELF2-AS1Q8N7Q2 184 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 BBS1Q8NFJ9 593 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 TMEM186Q96B77 213 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 CENPNQ96H22 339 aaPredicted RBP13.42□□□□□ -0.26
DDX54-204ENST00000546898 REPIN1Q9BWE0 567 aaKnown RBP13.42□□□□□ -0.26
DDX54-204ENST00000546898 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 TMEFF2Q9UIK5 374 aaPredicted RBP13.42□□□□□ -0.26
DDX54-204ENST00000546898 SVEP1Q4LDE5 3571 aa13.42□□□□□ -0.26
DDX54-204ENST00000546898 TRAV20A0A0B4J274 112 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 GGT3PA6NGU5 568 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 CD300LBA8K4G0 201 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SELENOFO60613 162 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 H2BFMP0C1H6 154 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SLC2A1P11166 492 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SRD5A1P18405 259 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 OPRL1P41146 370 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 CD200P41217 278 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 GATA4P43694 442 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 RAD23AP54725 363 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 ACTR3P61158 418 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 APOFQ13790 326 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 ZNF181Q2M3W8 571 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SPICQ8N5J4 248 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 OR52H1Q8NGJ2 320 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 OR2AE1Q8NHA4 323 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 ERGIC1Q969X5 290 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SPSB4Q96A44 273 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 SIGLEC11Q96RL6 698 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 AMELYQ99218 206 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 DCAF16Q9NXF7 216 aa13.41□□□□□ -0.26
DDX54-204ENST00000546898 MRPL15Q9P015 296 aaKnown RBP13.41□□□□□ -0.26
DDX54-204ENST00000546898 ZAR1LA6NP61 321 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 F5H5P2 479 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 H0YL77 283 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 EBAG9O00559 213 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 MITFO75030 526 aaPredicted RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 ANXA2P07355 339 aaKnown RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 ANOS1P23352 680 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 CFL1P23528 166 aaKnown RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 THBS2P35442 1172 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 DDOSTP39656 456 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 NAA10P41227 235 aaPredicted RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 PRSS12P56730 875 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 BTG1P62324 171 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 ZFP1Q6P2D0 407 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 SLC16A9Q7RTY1 509 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 MUC20Q8N307 709 aaPredicted RBP13.4□□□□□ -0.26
DDX54-204ENST00000546898 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 NIPAL2Q9H841 368 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.26
DDX54-204ENST00000546898 CCDC182A6NF36 153 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 TMEM178BH3BS89 294 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 TBX1O43435 398 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 PRKYO43930 277 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 GMDSO60547 372 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 ZNF121P58317 390 aaPredicted RBP13.39□□□□□ -0.27
DDX54-204ENST00000546898 OR8G1Q15617 311 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 TIGD6Q17RP2 521 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 IL17RELQ6ZVW7 336 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 PRSS45Q7RTY3 260 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 C10orf67Q8IYJ2 551 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 C1orf87Q8N0U7 546 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
DDX54-204ENST00000546898 TMEM163Q8TC26 289 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms