RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 K7ERU9 68 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 YPEL5P62699 121 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 DSC1Q08554 894 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 PHLDA2Q53GA4 152 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 C1orf140Q5VVS0 124 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 FAAP20Q6NZ36 180 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 SIRT6Q8N6T7 355 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 OR4F5Q8NH21 305 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-212ENST00000546744 OR4F4Q96R69 305 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CDCP1Q9H5V8 836 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 LIN7CQ9NUP9 197 aaKnown RBP11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CTSFQ9UBX1 484 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 PTPRFP10586 1907 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 LOC285556D6RIA3 1793 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 C7orf77A4D0Y5 90 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 ANKUB1A6NFN9 424 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 C4orf47A7E2U8 309 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CD1AP06126 327 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CRHP06850 196 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 IRF2P14316 349 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 DLK1P80370 383 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 AWAT1Q58HT5 328 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 OR2A2Q6IF42 318 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 LSRQ86X29 649 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-212ENST00000546744 ADGRL4Q9HBW9 690 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 DMRT1Q9Y5R6 373 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 RLFQ13129 1914 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF814B7Z6K7 855 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 K7EQM0 130 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 HSBP1O75506 76 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 ZFAND5O76080 213 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 SLC2A10O95528 541 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 WNT11O96014 354 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 PSMB5P28074 263 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 RUNX3Q13761 415 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM52BQ4KMG9 183 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 CPT1CQ8TCG5 803 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 PIGCQ92535 297 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 OR8B4Q96RC9 309 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 GPR87Q9BY21 358 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 NINQ8N4C6 2090 aa11.61□□□□□ -0.55
PTCH1-212ENST00000546744 UTS2O95399 124 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CTGFP29279 349 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 WNT3P56703 355 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 DPTQ07507 201 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 NSUN5P2Q63ZY6 315 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 DMKNQ6E0U4 476 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 WDR73Q6P4I2 378 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 DOK4Q8TEW6 326 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 PELI1Q96FA3 418 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SMIM14Q96QK8 99 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 TRAPPC2LQ9UL33 140 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 DAPP1Q9UN19 280 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 BSGP35613 385 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 APOBEC1P41238 236 aaKnown RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 KLF9Q13886 244 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CLLU1OSQ5K130 101 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 OR4N2Q8NGD1 307 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SOX7Q9BT81 388 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 KIR3DX1Q9H7L2 352 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SFXN1Q9H9B4 322 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 MMP24Q9Y5R2 645 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 OGG1O15527 345 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 PTP4A3O75365 173 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CXCL3P19876 107 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 IKZF1Q13422 519 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF528Q3MIS6 628 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 FAM69BQ5VUD6 431 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM268Q5VZI3 342 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 METRNLQ641Q3 311 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 METTL27Q8N6F8 245 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 ZFP62Q8NB50 900 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 GPR32P1Q8NGA4 272 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms