RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 PRR23D1E9PI22 279 aaPredicted RBP12.91□□□□□ -0.34
SSH1-204ENST00000546697 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 LCATP04180 440 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 SPARCP09486 303 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
SSH1-204ENST00000546697 FCGR1AP12314 374 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 GATA3P23771 443 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 DDOSTP39656 456 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 SRP9P49458 86 aaKnown RBP12.91□□□□□ -0.34
SSH1-204ENST00000546697 MMP16P51512 607 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 ZNF92Q03936 586 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 PGAP1Q75T13 922 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 PEG10Q86TG7 708 aaKnown RBP12.91□□□□□ -0.34
SSH1-204ENST00000546697 ATG16L2Q8NAA4 619 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 OSBPL10Q9BXB5 764 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 MED20Q9H944 212 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 DCAF16Q9NXF7 216 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 MRPL15Q9P015 296 aaKnown RBP12.91□□□□□ -0.34
SSH1-204ENST00000546697 AP4S1Q9Y587 144 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 STAB1Q9NY15 2570 aa12.91□□□□□ -0.34
SSH1-204ENST00000546697 CD300LBA8K4G0 201 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 XRCC2O43543 280 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 GMDSO60547 372 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 SRD5A1P18405 259 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 FASP25445 335 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 MVKQ03426 396 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 MAB21L1Q13394 359 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 PTGES3Q15185 160 aaKnown RBP12.9□□□□□ -0.34
SSH1-204ENST00000546697 AVPI1Q5T686 147 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 C1orf146Q5VVC0 180 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 CPOQ8IVL8 374 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 OR52H1Q8NGJ2 320 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 COPS4Q9BT78 406 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 TEX12Q9BXU0 123 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 SP140LQ9H930 580 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.34
SSH1-204ENST00000546697 C5orf63A6NC05 138 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 H0YL77 283 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 J3QLI3 93 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 ALOX5APP20292 161 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 POU1F1P28069 291 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 DCTDP32321 178 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 BTG1P62324 171 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 ZMYND11Q15326 602 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 GLYATL3Q5SZD4 288 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 ERI1Q8IV48 349 aaKnown RBP12.89□□□□□ -0.35
SSH1-204ENST00000546697 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 AMELYQ99218 206 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 MDFIQ99750 246 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 YIPF3Q9GZM5 350 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 RGCCQ9H4X1 137 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 NIPAL2Q9H841 368 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
SSH1-204ENST00000546697 ENOPH1Q9UHY7 261 aa12.89□□□□□ -0.35
SSH1-204ENST00000546697 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 E9PQ18 207 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 G3V2T6 193 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 PLPP2O43688 288 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 LYNP07948 512 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 CFL1P23528 166 aaKnown RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 PMELP40967 661 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 ACTR3P61158 418 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 ROM1Q03395 351 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 EIF2B1Q14232 305 aaKnown RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 TEX29Q8N6K0 151 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 SPERTQ8NA61 448 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 ZMYND19Q96E35 227 aaPredicted RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 CENPNQ96H22 339 aaPredicted RBP12.88□□□□□ -0.35
SSH1-204ENST00000546697 TEAD3Q99594 435 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 OR51V1Q9H2C8 321 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 HAO2Q9NYQ3 351 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 ZNF391Q9UJN7 358 aa12.88□□□□□ -0.35
SSH1-204ENST00000546697 hCG_38984A0A1B0GV85 526 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 F5H5P2 479 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 PNPP00491 289 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 FSHBP01225 129 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 SLC6A9P48067 706 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 CX3CR1P49238 355 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 PRKXP51817 358 aa12.87□□□□□ -0.35
SSH1-204ENST00000546697 FAM3AP98173 230 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms