RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 POM121L2Q96KW2 1035 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 AMELYQ99218 206 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 TEAD3Q99594 435 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ABHD6Q9BV23 337 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 TTTY10Q9BZA0 68 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 YIPF3Q9GZM5 350 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 CLN6Q9NWW5 311 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 HAO2Q9NYQ3 351 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 LAMP5Q9UJQ1 280 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 COPS3Q9UNS2 423 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM14AQ9Y6G1 99 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 PDZD2O15018 2839 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ITPR3Q14573 2671 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CHD3Q12873 2000 aaKnown RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 LOC100509620A0A075B734 347 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 PRR32B1ATL7 298 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 M0R135 149 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 HS3ST1O14792 307 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 PHYHO14832 338 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 GPRIN2O60269 458 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 SMPD2O60906 423 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 PLAUP00749 431 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF35P13682 527 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 PRF1P14222 555 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ALOX5APP20292 161 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CCNOP22674 350 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 MYF6P23409 242 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 HSD11B1P28845 292 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OTX1P32242 354 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ATP6V1E1P36543 226 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OPRL1P41146 370 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 WNT5AP41221 380 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 SLC6A9P48067 706 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CXCR4P61073 352 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 RPS23P62266 143 aaKnown RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 GRB2P62993 217 aaKnown RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 NKX6-1P78426 367 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 HGFACQ04756 655 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 KRTAP27-1Q3LI81 207 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 KRT80Q6KB66 452 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 LRRN1Q6UXK5 716 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF101Q8IZC7 436 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 NUP37Q8NFH4 326 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OR10H4Q8NGA5 316 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OR4F15Q8NGB8 312 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 IPCEF1Q8WWN9 437 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ASB17Q8WXJ9 295 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 AKAP1Q92667 903 aaKnown RBP eCLIP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 NEUROG1Q92886 237 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 FBXW5Q969U6 566 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 SPTSSAQ969W0 71 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 MBD6Q96DN6 1003 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 LGALS12Q96DT0 336 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF799Q96GE5 643 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CNBD2Q96M20 576 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 MNTQ99583 582 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 TBX5Q99593 518 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 DOK1Q99704 481 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 RHNO1Q9BSD3 238 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OR51B6Q9H340 312 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 Q9H521 79 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 UBTD1Q9HAC8 227 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 AMBNQ9NP70 447 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CA10Q9NS85 328 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 CENPMQ9NSP4 180 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 RAB26Q9ULW5 256 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 RPL36Q9Y3U8 105 aaKnown RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 LRP12Q9Y561 859 aa5.45□□□□□ -1.54
PRKDC-211ENST00000546304 FLNAP21333 2647 aaKnown RBP5.45□□□□□ -1.54
PRKDC-211ENST00000546304 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 A0A1W2PQL4 384 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-211ENST00000546304 IRGMA1A4Y4 181 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 F5H5K5 113 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 SLC1A7O00341 560 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 FAM20BO75063 409 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 FADS2O95864 444 aaKnown RBP5.44□□□□□ -1.54
PRKDC-211ENST00000546304 PLATP00750 562 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 H2BFMP0C1H6 154 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ACSM4P0C7M7 580 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 OR2T7P0C7T2 308 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 NR4A1P22736 598 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 PCSK6P29122 969 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 SLC15A1P46059 708 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 CX3CR1P49238 355 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 RGS6P49758 472 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ACTA2P62736 377 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ACTG2P63267 376 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ROM1Q03395 351 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 RAB40BQ12829 278 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 TAF13Q15543 124 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 CD276Q5ZPR3 534 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 LAIR2Q6ISS4 152 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 KCTD18Q6PI47 426 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ARL9Q6T311 187 aa5.44□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF322Q6U7Q0 402 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms