RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SPARCP09486 303 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 PPIAL4GP0DN37 164 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZNF3P17036 446 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 OTX1P32242 354 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 DDOSTP39656 456 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 CD200P41217 278 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 COMPP49747 757 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 ENTPD1P49961 510 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 GRB2P62993 217 aaKnown RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 PAX8Q06710 450 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 CRMP1Q14194 572 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 OR8G1Q15617 311 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 KCNJ8Q15842 424 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZNF404Q494X3 552 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TEX30Q5JUR7 227 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZNF362Q5T0B9 420 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 CD300LDQ6UXZ3 194 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 DCXRQ7Z4W1 244 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 NAA40Q86UY6 237 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 C3orf56Q8N813 242 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 OR51L1Q8NGJ5 315 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 OR9Q1Q8NGQ5 310 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 RAB40AQ8WXH6 277 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZMYND19Q96E35 227 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 KCNJ15Q99712 375 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TMEM246Q9BRR3 403 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 PLA2G12AQ9BZM1 189 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 OPA3Q9H6K4 179 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZMAT3Q9HA38 289 aaKnown RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 FN3KRPQ9HA64 309 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TRIM36Q9NQ86 728 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 CENPMQ9NSP4 180 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 MRPL15Q9P015 296 aaKnown RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 RNF7Q9UBF6 113 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 COMMD3-BMI1R4GMX3 469 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 KIR2DS1A0A191URI9 304 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 ZNF878C9JN71 531 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 LGALS8O00214 317 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 GNGT2O14610 69 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PHYHO14832 338 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 XRCC2O43543 280 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 NDUFA2O43678 99 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 ZNF205O95201 554 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 RAP2AP10114 183 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 SPI1P17947 270 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PAICSP22234 425 aaKnown RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 CA6P23280 308 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 CFPP27918 469 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PMELP40967 661 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 MTNR1AP48039 350 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PITPNBP48739 271 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PRKXP51817 358 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 SEC61A1P61619 476 aaKnown RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 DBPQ10586 325 aaPredicted RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 PPP1R8Q12972 351 aaKnown RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 MAB21L1Q13394 359 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 PCK2Q16822 640 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 DCDC5Q6ZRR9 648 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 DOK3Q7L591 496 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 SHFQ7M4L6 423 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 ZNF511Q8NB15 262 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 OR10G2Q8NGC3 310 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 OR8D4Q8NGM9 314 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 OR10S1Q8NGN2 331 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 OR6K6Q8NGW6 343 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 TEX47Q8TBZ9 253 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 GIPC3Q8TF64 312 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 C22orf15Q8WYQ4 148 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 DVL3Q92997 716 aaPredicted RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 SLAMF6Q96DU3 332 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 ASB9Q96DX5 294 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 CHID1Q9BWS9 393 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 MS4A7Q9GZW8 240 aaPredicted RBP7.84□□□□□ -1.15
YBX3-218ENST00000546298 C1orf21Q9H246 121 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 TOR3AQ9H497 397 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 CMC2Q9NRP2 79 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 UFSP2Q9NUQ7 469 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 C14orf119Q9NWQ9 140 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 ERVK-18Q9QC07 812 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 CLN8Q9UBY8 286 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 U3KQV3 271 aa7.84□□□□□ -1.15
YBX3-218ENST00000546298 IGHV2-70DA0A0C4DH43 119 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ARRDC5A6NEK1 342 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 AQP12BA6NM10 295 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ANKRD30BLA7E2S9 258 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 H3BN98 237 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 FAM20BO75063 409 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 SOX14O95416 240 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 PTBP3O95758 552 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 CST1P01037 141 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 CFL1P23528 166 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 CD80P33681 288 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 GRK5P34947 590 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 RBMXP38159 391 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 RPS27P42677 84 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 NPY4RP50391 375 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 UBA52P62987 128 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 MS4A2Q01362 244 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms