RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
SRP54-202ENST00000546080 TIMM10BQ9Y5J6 103 aa12.66□□□□□ -0.38
SRP54-202ENST00000546080 CACNA1CQ13936 2221 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 A0A1W2PPE3 182 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 FAM157AC9JC47 383 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 PI3P19957 117 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 AGAP20933 346 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 FCARP24071 287 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 CD1CP29017 333 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
SRP54-202ENST00000546080 EMP2P54851 167 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 Q6ZRG5 221 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 COX15Q7KZN9 410 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
SRP54-202ENST00000546080 LINC00346Q8IVM7 164 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 YAF2Q8IY57 180 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 PRR22Q8IZ63 422 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 OR2I1PQ8NGU4 316 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 BMFQ96LC9 184 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 ADOQ96SZ5 270 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 NUDT16L1Q9BRJ7 211 aaKnown RBP12.65□□□□□ -0.38
SRP54-202ENST00000546080 SLC26A1Q9H2B4 701 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 PTGES2Q9H7Z7 377 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 GSKIPQ9P0R6 139 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 GHRLQ9UBU3 117 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 MYO7AQ13402 2215 aa12.65□□□□□ -0.38
SRP54-202ENST00000546080 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 H2BFMP0C1H6 154 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 CCL5P13501 91 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 FPR2P25090 351 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 KRBOX4Q5JUW0 171 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 VAX1Q5SQQ9 334 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
SRP54-202ENST00000546080 ARMC6Q6NXE6 501 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 C5orf46Q6UWT4 87 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 SFTPA2Q8IWL1 248 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 ZNF101Q8IZC7 436 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 AVL9Q8NBF6 648 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 SECTM1Q8WVN6 248 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 RELTQ969Z4 430 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 NICN1Q9BSH3 213 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 CENPMQ9NSP4 180 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 TXNL1O43396 289 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
SRP54-202ENST00000546080 OR8U9P0C7N5 309 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 GP1BBP13224 206 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 ID4P47928 161 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 CLDN6P56747 220 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 HGFACQ04756 655 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 GPM6BQ13491 265 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 AWAT1Q58HT5 328 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 ANGPTL5Q86XS5 388 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 METTL27Q8N6F8 245 aaPredicted RBP12.64□□□□□ -0.39
SRP54-202ENST00000546080 ZNF321PQ8N8H1 164 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 C19orf47Q8N9M1 422 aaKnown RBP12.64□□□□□ -0.39
SRP54-202ENST00000546080 OR8U1Q8NH10 309 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 SLC5A6Q9Y289 635 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
SRP54-202ENST00000546080 A6NLC8 198 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 C17orf51A8MQB3 221 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 TMEM14DPA8MWL7 114 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 PRAMEF26H0Y7S4 382 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 TNFRSF10CO14798 259 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 DXOO77932 396 aaKnown RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 CST4P01036 141 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 IGHMP01871 453 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 KDM8Q8N371 416 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 OR13C9Q8NGT0 318 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 ZNF775Q96BV0 537 aaPredicted RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 NOSIPQ9Y314 301 aaKnown RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 SYT7O43581 403 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 CHRM2P08172 466 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 HOXB5P09067 269 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 GSTP1P09211 210 aaKnown RBP12.63□□□□□ -0.39
SRP54-202ENST00000546080 HKR1P10072 659 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 GLP1RP43220 463 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 HSD17B7P56937 341 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 TGIF1Q15583 401 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 KIF26BQ2KJY2 2108 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 TMEM268Q5VZI3 342 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 DNM1P34Q6PK57 102 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 SLC26A10Q8NG04 563 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 OR5H2Q8NGV7 314 aa12.63□□□□□ -0.39
SRP54-202ENST00000546080 SLC37A2Q8TED4 501 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms