RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GPR148Q8TDV2 347 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 SPOCK3Q9BQ16 436 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 BATF3Q9NR55 127 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 GRIP1Q9Y3R0 1128 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 USP9YO00507 2555 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 A0A1B0GVI7 797 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 VSTM5A8MXK1 200 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 E9PI62 339 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 SMPD2O60906 423 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 ZFPL1O95159 310 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 TTRP02766 147 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 RAF1P04049 648 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 CD2P06729 351 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 DDOSTP39656 456 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 KIR2DL3P43628 341 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 UCP2P55851 309 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 MFGE8Q08431 387 aaPredicted RBP13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 TSTQ16762 297 aaKnown RBP13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 NCMAPQ5T1S8 102 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 LIPKQ5VXJ0 399 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 CD200R1LQ6Q8B3 271 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 FBXW12Q6X9E4 464 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 FAM57BQ71RH2 274 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 OR8B12Q8NGG6 310 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 GHSRQ92847 366 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 KCNN3Q9UGI6 736 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 SLC22A13Q9Y226 551 aa13.84□□□□□ -0.19
PRPF40A-212ENST00000545856 SMIM31A0A1B0GVY4 71 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 CELA3BP08861 270 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 SELEP16581 610 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 CCNOP22674 350 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 NR4A1P22736 598 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 FGF9P31371 208 aaPredicted RBP13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 GLRXP35754 106 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 LIPAP38571 399 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 PSMB10P40306 273 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 WNT5AP41221 380 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 KIR3DL2P43630 455 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 GTF2A1P52655 376 aaPredicted RBP13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 DAZAP2Q15038 168 aaPredicted RBP13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 KRT74Q7RTS7 529 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF420Q8TAQ5 688 aaPredicted RBP13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 SLC7A6Q92536 515 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF442Q9H7R0 627 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 CGGBP1Q9UFW8 167 aaPredicted RBP13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 STUB1Q9UNE7 303 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 GTF2A1LQ9UNN4 478 aa13.83□□□□□ -0.19
PRPF40A-212ENST00000545856 ABCA4P78363 2273 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 TRDV1A0A1B0GX56 115 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF701M0R085 212 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 SC5DO75845 299 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 DHRS3O75911 302 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 ATE1O95260 518 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 CD3EP07766 207 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 RAC2P15153 192 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 CD36P16671 472 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 NKX6-1P78426 367 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 HGFACQ04756 655 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 SSX1Q16384 188 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 Q499Y3 187 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 CSNK2A3Q8NEV1 391 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 YIPF6Q96EC8 236 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 REPIN1Q9BWE0 567 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 ABCB9Q9NP78 766 aa13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 FBXO9Q9UK97 447 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 SF3B6Q9Y3B4 125 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-212ENST00000545856 TENM4Q6N022 2769 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 TRBV5-5A0A0J9YX44 114 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 LOC107986453A0A1B0GWG9 222 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 TBX1O43435 398 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 SYT7O43581 403 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 ARL6IP5O75915 188 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 GRNP28799 593 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 TGFBR2P37173 567 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 PPP1CBP62140 327 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 SLC3A1Q07837 685 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 OR8B8Q15620 311 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 MBNL2Q5VZF2 373 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 C22orf34Q6ZV56 151 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 RFPL4BQ6ZWI9 263 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 ANKRD13BQ86YJ7 626 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF101Q8IZC7 436 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 PAQR4Q8N4S7 273 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 ABHD4Q8TB40 342 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 RAB2BQ8WUD1 216 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 REEP6Q96HR9 211 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 TECTBQ96PL2 329 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 PDCD1LG2Q9BQ51 273 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 NOP16Q9Y3C1 178 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 RNF115Q9Y4L5 304 aa13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 SIRT4Q9Y6E7 314 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-212ENST00000545856 hCG_38984A0A1B0GV85 526 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 DPRXA6NFQ7 191 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 ABCD4O14678 606 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms