RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 REEP1Q9H902 201 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 RPRD1BQ9NQG5 326 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 IL20Q9NYY1 176 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 KCNG2Q9UJ96 466 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 B9D1Q9UPM9 204 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 LHFPL6Q9Y693 200 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 OR6C68A6NDL8 312 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 ARRDC5A6NEK1 342 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 BHLHE40O14503 412 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SPRY3O43610 288 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 TIMM8AO60220 97 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 TMEM127O75204 238 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 CCNB2O95067 398 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 MPZL1O95297 269 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 MSMBP08118 114 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 T-ENOLP0DO92 83 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 RPS19P39019 145 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 MS4A2Q01362 244 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SLC3A1Q07837 685 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 PSG7Q13046 419 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 TSTQ16762 297 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 MEP1BQ16820 701 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 KRTAP27-1Q3LI81 207 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SLC36A3Q495N2 470 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 CLEC12AQ5QGZ9 265 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 OR2T5Q6IEZ7 315 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SLC18B1Q6NT16 456 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 RINLQ6ZS11 566 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 RASSF6Q6ZTQ3 369 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 GLCCI1Q86VQ1 547 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 AQP11Q8NBQ7 271 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SDR9C7Q8NEX9 313 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 OR52E2Q8NGJ4 325 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 OR2T29Q8NH02 315 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 OR51F2Q8NH61 342 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SLC7A6Q92536 515 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 APOBEC3DQ96AK3 386 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 CCDC124Q96CT7 223 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 RAB39BQ96DA2 213 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 TIMD4Q96H15 378 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 DGCR6LQ9BY27 220 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 PLA2G12AQ9BZM1 189 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 NARFLQ9H6Q4 476 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 EGLN3Q9H6Z9 239 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 CYB5R1Q9UHQ9 305 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 KLHL21Q9UJP4 597 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 PURGQ9UJV8 347 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 BAIAP2Q9UQB8 552 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 GRIP1Q9Y3R0 1128 aa6.5□□□□□ -1.37
SNHG1-223ENST00000545440 SAMHD1Q9Y3Z3 626 aaKnown RBP6.5□□□□□ -1.37
SNHG1-223ENST00000545440 FAM157AC9JC47 383 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 WNT9BO14905 357 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 GPANK1O95872 356 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 RAP2AP10114 183 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TNFRSF1AP19438 455 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TNFSF4P23510 183 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 GGT2P36268 569 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 GNALP38405 381 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 CENPAP49450 140 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 LMO4P61968 165 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TNFAIP6P98066 277 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TRAP1Q12931 704 aaKnown RBP6.49□□□□□ -1.37
SNHG1-223ENST00000545440 ECH1Q13011 328 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 MICAQ29983 383 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 DNAL1Q4LDG9 190 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 CORO6Q6QEF8 472 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 FBXW12Q6X9E4 464 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 CFAP77Q6ZQR2 320 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TRPM8Q7Z2W7 1104 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-223ENST00000545440 LNX2Q8N448 690 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 OR5L1Q8NGL2 311 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 OR8D4Q8NGM9 314 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 OR2T4Q8NH00 348 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 SPATA3Q8NHX4 192 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 RAB1CQ92928 201 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TMEM186Q96B77 213 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 CLPTM1LQ96KA5 538 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 DDOQ99489 341 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 ATF6BQ99941 703 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 FN3KQ9H479 309 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 PNRC2Q9NPJ4 139 aaKnown RBP6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TBC1D23Q9NUY8 699 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 VNN3Q9NY84 501 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 TAS2R1Q9NYW7 299 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 WIPI2Q9Y4P8 454 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 CACNG2Q9Y698 323 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 U3KQV3 271 aa6.49□□□□□ -1.37
SNHG1-223ENST00000545440 DHRS12A0PJE2 317 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 AQP12BA6NM10 295 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 IQCF6A8MYZ5 107 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ACOT8O14734 319 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 SURF4O15260 269 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PHF1O43189 567 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 SOX14O95416 240 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 IGHV2-5P01817 119 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms