RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 XKRYO14609 159 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 IMPA2O14732 288 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 TXNDC12O95881 172 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 CA6P23280 308 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 EEF1B2P24534 225 aaKnown RBP12.02□□□□□ -0.49
RTN3-214ENST00000545432 TGM4P49221 684 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 ACSM1Q08AH1 577 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 OR8B8Q15620 311 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 ZBED5Q49AG3 693 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.49
RTN3-214ENST00000545432 NANOGP8Q6NSW7 305 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 C11orf53Q8IXP5 236 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 MICU2Q8IYU8 434 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 OFCC1Q8IZS5 231 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 DTX3Q8N9I9 347 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 OR4S1Q8NGB4 309 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 OR13C2Q8NGS9 318 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 NUAK2Q9H093 628 aa12.02□□□□□ -0.49
RTN3-214ENST00000545432 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
RTN3-214ENST00000545432 COL7A1Q02388 2944 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 A0A087WUU8 490 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 K7EIL1 84 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 FFAR1O14842 300 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
RTN3-214ENST00000545432 AMY2BP19961 511 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 SDHAP31040 664 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 SAA4P35542 130 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 PRSS12P56730 875 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 ECH1Q13011 328 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 OR8G1Q15617 311 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 GPR139Q6DWJ6 353 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 PGAP1Q75T13 922 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 Q8N2B8 174 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 C11orf44Q8N8P7 122 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 DCTN5Q9BTE1 182 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 TOR3AQ9H497 397 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 RNPEPL1Q9HAU8 725 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
RTN3-214ENST00000545432 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 C1orf123Q9NWV4 160 aa12.01□□□□□ -0.49
RTN3-214ENST00000545432 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
RTN3-214ENST00000545432 IGLV1-36A0A0B4J1U3 117 aa12□□□□□ -0.49
RTN3-214ENST00000545432 A0A1B0GW55 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DCTN6O00399 190 aa12□□□□□ -0.49
RTN3-214ENST00000545432 IFNA14P01570 189 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L2P0CJ85 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L3P0CJ86 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L4P0CJ87 422 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L5P0CJ88 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L6P0CJ89 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L7P0CJ90 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 RPL4P36578 427 aaKnown RBP12□□□□□ -0.49
RTN3-214ENST00000545432 SELENOWP63302 87 aa12□□□□□ -0.49
RTN3-214ENST00000545432 MALLQ13021 153 aa12□□□□□ -0.49
RTN3-214ENST00000545432 KRR1Q13601 381 aaKnown RBP12□□□□□ -0.49
RTN3-214ENST00000545432 NFYCQ13952 458 aa12□□□□□ -0.49
RTN3-214ENST00000545432 TRAM2Q15035 370 aa12□□□□□ -0.49
RTN3-214ENST00000545432 SLC18B1Q6NT16 456 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4L9Q6RFH8 374 aaPredicted RBP12□□□□□ -0.49
RTN3-214ENST00000545432 ZNF826PQ6ZT77 177 aa12□□□□□ -0.49
RTN3-214ENST00000545432 PTCHD4Q6ZW05 846 aa12□□□□□ -0.49
RTN3-214ENST00000545432 MBOAT2Q6ZWT7 520 aa12□□□□□ -0.49
RTN3-214ENST00000545432 ADCK1Q86TW2 530 aa12□□□□□ -0.49
RTN3-214ENST00000545432 NDUFA11Q86Y39 141 aa12□□□□□ -0.49
RTN3-214ENST00000545432 PAPD5Q8NDF8 572 aaKnown RBP12□□□□□ -0.49
RTN3-214ENST00000545432 OR4C13Q8NGP0 309 aa12□□□□□ -0.49
RTN3-214ENST00000545432 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
RTN3-214ENST00000545432 SPRYD4Q8WW59 207 aaPredicted RBP12□□□□□ -0.49
RTN3-214ENST00000545432 ACOT11Q8WXI4 607 aaPredicted RBP12□□□□□ -0.49
RTN3-214ENST00000545432 ST8SIA4Q92187 359 aa12□□□□□ -0.49
RTN3-214ENST00000545432 WWC2-AS2Q96NR7 200 aa12□□□□□ -0.49
RTN3-214ENST00000545432 MMP28Q9H239 520 aa12□□□□□ -0.49
RTN3-214ENST00000545432 NKIRAS1Q9NYS0 192 aa12□□□□□ -0.49
RTN3-214ENST00000545432 DUX4Q9UBX2 424 aa12□□□□□ -0.49
RTN3-214ENST00000545432 RPS6KA6Q9UK32 745 aa12□□□□□ -0.49
RTN3-214ENST00000545432 SIGLEC7Q9Y286 467 aa12□□□□□ -0.49
RTN3-214ENST00000545432 BIRC6Q9NR09 4857 aa12□□□□□ -0.49
RTN3-214ENST00000545432 H3BUX3 64 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 ANGPT2O15123 496 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 IFNA8P32881 189 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 KDELR2P33947 212 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 MDH1P40925 334 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 CDKN2AP42771 156 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 CYBRD1Q53TN4 286 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 CORO6Q6QEF8 472 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 TSEN54Q7Z6J9 526 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 BOLLQ8N9W6 283 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms