RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
DDX11-228ENST00000545115 FN3KRPQ9HA64 309 aa11.75□□□□□ -0.53
DDX11-228ENST00000545115 MRPL22Q9NWU5 206 aaKnown RBP11.75□□□□□ -0.53
DDX11-228ENST00000545115 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
DDX11-228ENST00000545115 RNF7Q9UBF6 113 aa11.75□□□□□ -0.53
DDX11-228ENST00000545115 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
DDX11-228ENST00000545115 DOCK11Q5JSL3 2073 aa11.75□□□□□ -0.53
DDX11-228ENST00000545115 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 CD300LBA8K4G0 201 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 GMDSO60547 372 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 PTBP3O95758 552 aaKnown RBP11.74□□□□□ -0.53
DDX11-228ENST00000545115 LIPFP07098 398 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 ZNF823P16415 610 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 CA6P23280 308 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 OMGP23515 440 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 PRDX6P30041 224 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 GSSP48637 474 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDX11-228ENST00000545115 ZNF362Q5T0B9 420 aaPredicted RBP11.74□□□□□ -0.53
DDX11-228ENST00000545115 CD276Q5ZPR3 534 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 ZNF620Q6ZNG0 422 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 MCUR1Q96AQ8 359 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
DDX11-228ENST00000545115 MYLK2Q9H1R3 596 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 NOX4Q9NPH5 578 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 TRIM36Q9NQ86 728 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 ZNF446Q9NWS9 450 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 MAGEL2Q9UJ55 1249 aa11.74□□□□□ -0.53
DDX11-228ENST00000545115 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 ZNF879B4DU55 563 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 LGALS8O00214 317 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 P2RY10O00398 339 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 KNG1P01042 644 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 FABP3P05413 133 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 CRYBA1P05813 215 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 RRM2P31350 389 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
DDX11-228ENST00000545115 CFHR2P36980 270 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 RPS27P42677 84 aaKnown RBP11.73□□□□□ -0.53
DDX11-228ENST00000545115 ZNF92Q03936 586 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 TSPAN31Q12999 210 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 SLC35F1Q5T1Q4 408 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 SFRP4Q6FHJ7 346 aaPredicted RBP11.73□□□□□ -0.53
DDX11-228ENST00000545115 Q6YL49 198 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 TMEM86BQ8N661 226 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 PROKR2Q8NFJ6 384 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 OR52L1Q8NGH7 329 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 OR2AE1Q8NHA4 323 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 BEX1Q9HBH7 125 aa11.73□□□□□ -0.53
DDX11-228ENST00000545115 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
DDX11-228ENST00000545115 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 GGT3PA6NGU5 568 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 ADAM20O43506 726 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 NDUFA2O43678 99 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 TOX4O94842 621 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 SFTPBP07988 381 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 HSD17B1P14061 328 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 MMP9P14780 707 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 RAG2P55895 527 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
DDX11-228ENST00000545115 OR8B8Q15620 311 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 RUSC1-AS1Q66K80 236 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 RPL13AP3Q6NVV1 102 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 PGBD2Q6P3X8 592 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 FIP1L1Q6UN15 594 aaKnown RBP11.72□□□□□ -0.53
DDX11-228ENST00000545115 DRAM2Q6UX65 266 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
DDX11-228ENST00000545115 PNLDC1Q8NA58 520 aaKnown RBP11.72□□□□□ -0.53
DDX11-228ENST00000545115 SPERTQ8NA61 448 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 OR4C15Q8NGM1 316 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 OR2T4Q8NH00 348 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 OR4F5Q8NH21 305 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 GNPDA2Q8TDQ7 276 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 WFDC12Q8WWY7 111 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 FAM71F1Q96KD3 344 aaPredicted RBP11.72□□□□□ -0.53
DDX11-228ENST00000545115 NSMCE2Q96MF7 247 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 TNFRSF19Q9NS68 423 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 POMT1Q9Y6A1 747 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 CDH10Q9Y6N8 788 aa11.72□□□□□ -0.53
DDX11-228ENST00000545115 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 BHLHE40O14503 412 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
DDX11-228ENST00000545115 ARPC2O15144 300 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 ANOS1P23352 680 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 PYCR1P32322 319 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 DEFA6Q01524 100 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 MZT1Q08AG7 82 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 METTL11BQ5VVY1 283 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 C17orf107Q6ZR85 190 aa11.71□□□□□ -0.53
DDX11-228ENST00000545115 DCXRQ7Z4W1 244 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms