RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SELENOFO60613 162 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 MITFO75030 526 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-216ENST00000544996 IFNA2P01563 188 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 ANXA2P07355 339 aaKnown RBP13.3□□□□□ -0.28
CCDC78-216ENST00000544996 H2BFMP0C1H6 154 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 SLC2A1P11166 492 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 IGFBP5P24593 272 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 PRSS12P56730 875 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 LMO4P61968 165 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 ZNF92Q03936 586 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 GLYATL3Q5SZD4 288 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 ZFP1Q6P2D0 407 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 GLCCI1Q86VQ1 547 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 BBS1Q8NFJ9 593 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 PYDC1Q8WXC3 89 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 GAL3ST1Q99999 423 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
CCDC78-216ENST00000544996 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-216ENST00000544996 OAZ3Q9UMX2 235 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 NPTNQ9Y639 398 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 CD300LBA8K4G0 201 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 TBX1O43435 398 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 FAM157CP0CG43 387 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 SLC2A5P22732 501 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 OPRL1P41146 370 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 NAA10P41227 235 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-216ENST00000544996 DVL1P1P54792 670 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-216ENST00000544996 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
CCDC78-216ENST00000544996 FAM120AOSQ5T036 256 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 SLX4IPQ5VYV7 408 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 SLC16A9Q7RTY1 509 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 OR52H1Q8NGJ2 320 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 OR51F2Q8NH61 342 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 OR2AE1Q8NHA4 323 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 MEGF10Q96KG7 1140 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 AMELYQ99218 206 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 TEAD3Q99594 435 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 CIB1Q99828 191 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 RBM4BQ9BQ04 359 aaKnown RBP13.29□□□□□ -0.28
CCDC78-216ENST00000544996 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 GCM1Q9NP62 436 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 LAMP5Q9UJQ1 280 aa13.29□□□□□ -0.28
CCDC78-216ENST00000544996 A0A1B0GWJ7 208 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 SAC3D1A6NKF1 404 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 LRRC30A6NM36 301 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 ZAR1LA6NP61 321 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 F5H5P2 479 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 H0YL77 283 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 MLNRO43193 412 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 PRKYO43930 277 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 HLA-DPB1P04440 258 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 MSMBP08118 114 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 SBK2P0C263 348 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 CFL1P23528 166 aaKnown RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 ZNF121P58317 390 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 KCTD18Q6PI47 426 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 PRIMA1Q86XR5 153 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 TMEM186Q96B77 213 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 OR10A2Q9H208 303 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 UBAP1Q9NZ09 502 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 DNAJC27Q9NZQ0 273 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 TMEFF2Q9UIK5 374 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
CCDC78-216ENST00000544996 NAV3Q8IVL0 2385 aa13.28□□□□□ -0.28
CCDC78-216ENST00000544996 TRAV20A0A0B4J274 112 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 FAM157AC9JC47 383 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 CA6P23280 308 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 EPHA2P29317 976 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 DDOSTP39656 456 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 MMP16P51512 607 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 BTG1P62324 171 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 OR8G1Q15617 311 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 C12orf73Q69YU5 71 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 FAM57BQ71RH2 274 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 KLHL36Q8N4N3 616 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 SPICQ8N5J4 248 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 CELF2-AS1Q8N7Q2 184 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 TCEANCQ8N8B7 351 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 TMEM163Q8TC26 289 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 SPSB4Q96A44 273 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 REEP6Q96HR9 211 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 PGAM5Q96HS1 289 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 RIBC2Q9H4K1 309 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
CCDC78-216ENST00000544996 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 ORC6Q9Y5N6 252 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 TMEM14AQ9Y6G1 99 aa13.27□□□□□ -0.29
CCDC78-216ENST00000544996 C5orf63A6NC05 138 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 SLC22A31A6NKX4 558 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 TMEM178BH3BS89 294 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 GMDSO60547 372 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 IGHV2-70P01814 119 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms