RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	GABRP	O00591	440 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	NMT2	O60551	498 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	USF1	P22415	310 aa	Predicted RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	HMOX2	P30519	316 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	RAB9A	P51151	201 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	ILK	Q13418	452 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	NCF4	Q15080	339 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	TWF2	Q6IBS0	349 aa	Known RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	EIF3M	Q7L2H7	374 aa	Known RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	SSX9	Q7RTT3	188 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	SPANXA2-OT1	Q8N9U9	137 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	SLIRP	Q9GZT3	109 aa	Known RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	MRM3	Q9HC36	420 aa	Known RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	CBY1	Q9Y3M2	126 aa		2.18	□□□□□ -2.06
RAP1B-231	ENST00000544639	UBN2	Q6ZU65	1347 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	KCNE1B	A0A087WTH5	132 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	OR5H1	A6NKK0	313 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	NDUFC2-KCTD14	E9PQ53	114 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639		M0R3G1	203 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	LGALS9	O00182	355 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	NME4	O00746	187 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	CLTA	P09496	248 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	PGA4	P0DJD7	388 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	PGA3	P0DJD8	388 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	PGA5	P0DJD9	388 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	RNASE2	P10153	161 aa	Known RBP	2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	PFN2	P35080	140 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	TALDO1	P37837	337 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	TNFSF9	P41273	254 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	CYP24A1	Q07973	514 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	PPID	Q08752	370 aa	Known RBP	2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	SIGLEC14	Q08ET2	396 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	TMEM53	Q6P2H8	277 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	JAGN1	Q8N5M9	183 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	LRRC52	Q8N7C0	313 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	ST20-AS1	Q8NBB2	130 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	CCDC148	Q8NFR7	591 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	OR56A4	Q8NGH8	313 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	BTN2A3P	Q96KV6	586 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	C11orf70	Q9BRQ4	267 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	TMEM243	Q9BU79	118 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	DCAF16	Q9NXF7	216 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	RCL1	Q9Y2P8	373 aa	Known RBP	2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	SHANK1	Q9Y566	2161 aa		2.17	□□□□□ -2.06
RAP1B-231	ENST00000544639	TSPAN11	A1L157	253 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	TNFRSF11B	O00300	401 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	CACNG3	O60359	315 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	EIF1B	O60739	113 aa	Known RBP	2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	PAH	P00439	452 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	HLA-H	P01893	362 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	CD70	P32970	193 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	EIF1	P41567	113 aa	Known RBP	2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	FABP6	P51161	128 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	CCNG1	P51959	295 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	NDUFA8	P51970	172 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	TAS2R46	P59540	309 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	PNOC	Q13519	176 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	ITIH4	Q14624	930 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	GCSAML	Q5JQS6	135 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	TEX30	Q5JUR7	227 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	HORMAD1	Q86X24	394 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	MIR7-3HG	Q8N6C7	128 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	TMEM105	Q8N8V8	129 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	OR10W1	Q8NGF6	305 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	OR1J4	Q8NGS1	313 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	OR52E5	Q8NH55	327 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	RPE	Q96AT9	228 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	HAUS1	Q96CS2	278 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	EXO5	Q9H790	373 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	CCNB1IP1	Q9NPC3	277 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	PDP1	Q9P0J1	537 aa	Predicted RBP	2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639	SAR1B	Q9Y6B6	198 aa		2.16	□□□□□ -2.06
RAP1B-231	ENST00000544639		A0A1B0GUH1	482 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	TEX46	H3BTG2	121 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	TAAR5	O14804	337 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	OXT	P01178	125 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	BMI1	P35226	326 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	POLR2I	P36954	125 aa	Known RBP	2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	RFC3	P40938	356 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	NBL1	P41271	181 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	PRLHR	P49683	370 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	RAB7A	P51149	207 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	UBE2M	P61081	183 aa	Known RBP	2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	TRMT5	Q32P41	509 aa	Known RBP	2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	YIF1B	Q5BJH7	314 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	STUM	Q69YW2	141 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	RTL4	Q6ZR62	310 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	ZNF101	Q8IZC7	436 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	OFCC1	Q8IZS5	231 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	ZNF645	Q8N7E2	425 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	C19orf18	Q8NEA5	215 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	OR4M1	Q8NGD0	313 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	PHF10	Q8WUB8	498 aa	Known RBP	2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	BPIFA3	Q9BQP9	254 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	TEKT3	Q9BXF9	490 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	AUNIP	Q9H7T9	357 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	MRPS30	Q9NP92	439 aa	Known RBP	2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	RGS18	Q9NS28	235 aa		2.15	□□□□□ -2.07
RAP1B-231	ENST00000544639	RHBDL2	Q9NX52	303 aa		2.15	□□□□□ -2.07

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms