RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	SNRPA	P09012	282 aa	Known RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	CECR9	P0C854	216 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ARR3	P36575	388 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	LMO4	P61968	165 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	KCNJ10	P78508	379 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	MRPS25	P82663	173 aa	Known RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC3A1	Q07837	685 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TRAP1	Q12931	704 aa	Known RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SKP2	Q13309	424 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	KLF9	Q13886	244 aa	Predicted RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	NDUFAF6	Q330K2	333 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ANKDD1A	Q495B1	522 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	HIKESHI	Q53FT3	197 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	PDZK1	Q5T2W1	519 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMEM225	Q6GV28	225 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF770	Q6IQ21	691 aa	Predicted RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ANKRD26P1	Q6NSI1	321 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TIFAB	Q6ZNK6	161 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	RIBC1	Q8N443	379 aa	Predicted RBP	5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZIC4	Q8N9L1	334 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SPATA4	Q8NEY3	305 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR4M2	Q8NGB6	313 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR1J1	Q8NGS3	322 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR5P2	Q8WZ92	322 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	RFT1	Q96AA3	541 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLCO4A1	Q96BD0	722 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	KCNA7	Q96RP8	456 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	CCT7	Q99832	543 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF416	Q9BWM5	594 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	LPAR2	Q9HBW0	351 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMEM216	Q9P0N5	145 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TBK1	Q9UHD2	729 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	ATP6V1H	Q9UI12	483 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	STUB1	Q9UNE7	303 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC35A3	Q9Y2D2	325 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMED5	Q9Y3A6	229 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	KCNE3	Q9Y6H6	103 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	MEGF8	Q7Z7M0	2845 aa		5.1	□□□□□ -1.59
CPSF7-222	ENST00000544585	SVEP1	Q4LDE5	3571 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	LOC105371242	A0A075B767	164 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585		A0A1B0GUS0	222 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	HNRNPCL2	B2RXH8	293 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMEM114	B3SHH9	223 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TRIM49D1	C9J1S8	452 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	RPL36A-HNRNPH2	H7BZ11	118 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585		M0R233	179 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	NR5A2	O00482	541 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	PPIH	O43447	177 aa	Known RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	FCMR	O60667	390 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	GMNN	O75496	209 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	UGT2B17	O75795	530 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	AKR7A3	O95154	331 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	MPZL1	O95297	269 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	GPI	P06744	558 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	IGFBP1	P08833	259 aa	Predicted RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	UBTFL6	P0CB48	400 aa	Predicted RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	EPHA2	P29317	976 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	CALCR	P30988	508 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	GLRX	P35754	106 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	IDH2	P48735	452 aa	Known RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	CNN1	P51911	297 aa	Known RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	FOXA1	P55317	472 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	SH3BGR	P55822	239 aa	Predicted RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	GNG11	P61952	73 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TWIST1	Q15672	202 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	ARHGAP11B	Q3KRB8	267 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	OTUD3	Q5T2D3	398 aa	Predicted RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	FAM219B	Q5XKK7	198 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	DLEU7	Q6UYE1	221 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	PRSS35	Q8N3Z0	413 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	CCNYL1	Q8N7R7	359 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	SFXN5	Q8TD22	340 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZG16B	Q96DA0	208 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	RAB39B	Q96DA2	213 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	NSL1	Q96IY1	281 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TSSK3	Q96PN8	268 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR7D2	Q96RA2	312 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TAPBPL	Q9BX59	468 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	LINC00470	Q9BZP3	86 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF385D	Q9H6B1	395 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	ESM1	Q9NQ30	184 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	EXOSC3	Q9NQT5	275 aa	Known RBP	5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	EXD2	Q9NVH0	621 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	ATAD3A	Q9NVI7	634 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	DCDC2	Q9UHG0	476 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	BAIAP2L1	Q9UHR4	511 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	SH3GLB1	Q9Y371	365 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMED7	Q9Y3B3	224 aa		5.09	□□□□□ -1.59
CPSF7-222	ENST00000544585	TENM1	Q9UKZ4	2725 aa		5.09	□□□□□ -1.6
CPSF7-222	ENST00000544585	WNK2	Q9Y3S1	2297 aa		5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	NUP214	P35658	2090 aa	Predicted RBP	5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	IGHV2OR16-5	A0A0B4J2B6	119 aa		5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585		E5RGE8	158 aa		5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	LYPLA1	O75608	230 aa	Predicted RBP	5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	LGI1	O95970	557 aa		5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	APOH	P02749	345 aa	Predicted RBP	5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	NEFH	P12036	1026 aa		5.08	□□□□□ -1.6
CPSF7-222	ENST00000544585	SDC1	P18827	310 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms