RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SLC36A2Q495M3 483 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 FBXW9Q5XUX1 488 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 INO80CQ6PI98 192 aaPredicted RBP17.32■□□□□ 0.36
COPS7A-218ENST00000543939 GDPD3Q7L5L3 318 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 OR1M1Q8NGA1 313 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 OR52H1Q8NGJ2 320 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 OR5M9Q8NGP3 310 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 SYNPRQ8TBG9 265 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 RAB40AQ8WXH6 277 aa17.32■□□□□ 0.36
COPS7A-218ENST00000543939 DOCK7Q96N67 2140 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 A0A096LPE4 126 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 A0A1W2PPZ6 126 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 OR14I1A6ND48 311 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 ABOP16442 354 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 ART1P52961 327 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 GUSBP1Q15486 140 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 SNAI3Q3KNW1 292 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 PLEKHN1Q494U1 663 aaPredicted RBP17.31■□□□□ 0.36
COPS7A-218ENST00000543939 PABPC1L2AQ5JQF8 200 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 C1orf100Q5SVJ3 147 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 TRIQKQ629K1 86 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 FGD2Q7Z6J4 655 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 OR51D1Q8NGF3 324 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 OR6M1Q8NGM8 313 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 FAM3DQ96BQ1 224 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 OR10A2Q9H208 303 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 TMEM138Q9NPI0 162 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 RABL2AQ9UBK7 228 aaPredicted RBP17.31■□□□□ 0.36
COPS7A-218ENST00000543939 CGGBP1Q9UFW8 167 aaPredicted RBP17.31■□□□□ 0.36
COPS7A-218ENST00000543939 ATPIF1Q9UII2 106 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 RABL2BQ9UNT1 228 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 RHBDD3Q9Y3P4 386 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 ACACAQ13085 2346 aa17.31■□□□□ 0.36
COPS7A-218ENST00000543939 SPNP16150 400 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 HTR2CP28335 458 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 MPGP29372 298 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 GLYATL3Q5SZD4 288 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 CCDC54Q8NEL0 328 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 FOXRED1Q96CU9 486 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-218ENST00000543939 HAVCR1Q96D42 359 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 NKX3-1Q99801 234 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-218ENST00000543939 RNF121Q9H920 327 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 TBCCD1Q9NVR7 557 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 RHBDL2Q9NX52 303 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 V9GYS6 101 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 GTF3C1Q12789 2109 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 LOC100289279A0A1B0GTE1 492 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 AHRRA9YTQ3 701 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 PLA2G10O15496 165 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 RAB3AP20336 220 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 POU3F4P49335 361 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 PITPNAQ00169 270 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 PLA2G7Q13093 441 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 C2orf76Q3KRA6 126 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 PGAP1Q75T13 922 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 CPEB3Q8NE35 698 aaKnown RBP17.3■□□□□ 0.36
COPS7A-218ENST00000543939 OR13C9Q8NGT0 318 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 WNT2BQ93097 391 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 SGK3Q96BR1 496 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 S100A16Q96FQ6 103 aaKnown RBP17.3■□□□□ 0.36
COPS7A-218ENST00000543939 ABHD17AQ96GS6 310 aa17.3■□□□□ 0.36
COPS7A-218ENST00000543939 SSX4O60224 188 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 DHRS3O75911 302 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 IL18BPO95998 194 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 RFX2P48378 723 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 MMP15P51511 669 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 TBR1Q16650 682 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 ACSF3Q4G176 576 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-218ENST00000543939 FAM214BQ7L5A3 538 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 OR5AS1Q8N127 324 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 JAGN1Q8N5M9 183 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 C19orf18Q8NEA5 215 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 OR52N4Q8NGI2 321 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 TRIM63Q969Q1 353 aa17.29■□□□□ 0.36
COPS7A-218ENST00000543939 LINC00854A0A1B0GVQ3 168 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 ZNF503-AS2A6NEH8 195 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 CTDSPLO15194 276 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 RRP8O43159 456 aaKnown RBP17.28■□□□□ 0.36
COPS7A-218ENST00000543939 SULT1B1O43704 296 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 HLA-HP01893 362 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 CRYABP02511 175 aaKnown RBP17.28■□□□□ 0.36
COPS7A-218ENST00000543939 TFAP2EQ6VUC0 442 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 C9orf106Q8NAJ2 232 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 OR1K1Q8NGR3 316 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 SORCS2Q96PQ0 1159 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 THAP7Q9BT49 309 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-218ENST00000543939 PLEKHA1Q9HB21 404 aa17.28■□□□□ 0.36
COPS7A-218ENST00000543939 MRPS7Q9Y2R9 242 aaKnown RBP17.28■□□□□ 0.36
COPS7A-218ENST00000543939 LANCL1O43813 399 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 LCATP04180 440 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 ERCC1P07992 297 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-218ENST00000543939 COX5BP10606 129 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 ANKRD16Q6P6B7 361 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 CCBE1Q6UXH8 406 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-218ENST00000543939 GCNT2Q8N0V5 402 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 BCL2L2Q92843 193 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-218ENST00000543939 RFT1Q96AA3 541 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 GPR137Q96N19 417 aa17.27■□□□□ 0.36
COPS7A-218ENST00000543939 ZFP3Q96NJ6 502 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms