RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 V9GYY9 64 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 LOC100509620A0A075B734 347 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 OR11H12B2RN74 326 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 XRCC3O43542 346 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TFP02787 698 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 CDKN2AP42771 156 aaKnown RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RPS27AP62979 156 aaKnown RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 JOSD1Q15040 202 aaPredicted RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 OR11H1Q8NG94 326 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 OR11H2Q8NH07 326 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TNFRSF13CQ96RJ3 184 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 VN1R1Q9GZP7 353 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 APMAPQ9HDC9 416 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 A0A0G2JMZ2 1700 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 LRRC37A2A6NM11 1700 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 IFITM10A6NMD0 228 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PIRO00625 290 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 OR2C1O95371 312 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 SFTPBP07988 381 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 SCGB1A1P11684 91 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 GDF1P27539 372 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 CTSOP43234 321 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TCP10Q12799 353 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 DET1Q7L5Y6 550 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 DND1Q8IYX4 353 aaKnown RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 CDRT4Q8N9R6 151 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 GUCD1Q96NT3 240 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 MARVELD1Q9BSK0 173 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF471Q9BX82 626 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 HAPLN2Q9GZV7 340 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 ADGRL4Q9HBW9 690 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 CRIM1Q9NZV1 1036 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 C3orf80F5H4A9 247 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 STK16O75716 305 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 DCTP40126 519 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PAX9P55771 341 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 MAD2L1BPQ15013 274 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 CDCP2Q5VXM1 449 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 LAX1Q8IWV1 398 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 DTWD1Q8N5C7 304 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 OR10G9Q8NGN4 311 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 OR52I2Q8NH67 350 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 UPRTQ96BW1 309 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 IP6K3Q96PC2 410 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PDCD2LQ9BRP1 358 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 GSTO2Q9H4Y5 243 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 MAGIXQ9H6Y5 334 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 MARCH4Q9P2E8 410 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PHIPQ8WWQ0 1821 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TRAV30A0A087WSZ9 112 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 SHISA7A6NL88 538 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 SDHBP21912 280 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 BMP5P22003 454 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 ACKR3P25106 362 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PRTGQ2VWP7 1150 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 MORN1Q5T089 497 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 FAM219BQ5XKK7 198 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 FRRS1Q6ZNA5 592 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 OR4D9Q8NGE8 314 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 OR1S2Q8NGQ3 325 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 RNF183Q96D59 192 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF670Q9BS34 389 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 RNF39Q9H2S5 420 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 TAS2R8Q9NYW2 309 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 PSORS1C1Q9UIG5 152 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 FAM96BQ9Y3D0 163 aa7.97□□□□□ -1.13
VPS13D-212ENST00000543766 A0A0G2JLL6 359 aaPredicted RBP7.96□□□□□ -1.13
VPS13D-212ENST00000543766 RAD51DO75771 328 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 ESDP10768 282 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 EDNRBP24530 442 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 SLC36A2Q495M3 483 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 RNASE12Q5GAN4 147 aaKnown RBP7.96□□□□□ -1.13
VPS13D-212ENST00000543766 WDR53Q7Z5U6 358 aaPredicted RBP7.96□□□□□ -1.13
VPS13D-212ENST00000543766 PRRT2Q7Z6L0 340 aaPredicted RBP7.96□□□□□ -1.13
VPS13D-212ENST00000543766 DOLPP1Q86YN1 238 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 OR4N5Q8IXE1 308 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 OR11H7Q8NGC8 314 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 OR56A4Q8NGH8 313 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 OR1P1Q8NH06 330 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 INPP5KQ9BT40 448 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 GPR27Q9NS67 375 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 GKN1Q9NS71 199 aa7.96□□□□□ -1.13
VPS13D-212ENST00000543766 MKI67P46013 3256 aaKnown RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 ODAMA1E959 279 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 SLURP2P0DP57 97 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 ITGB7P26010 798 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 TMEM267Q0VDI3 215 aaPredicted RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 ZP4Q12836 540 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 PLAC9Q5JTB6 97 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 PAGE3Q5JUK9 113 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 PARS2Q7L3T8 475 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms