RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 WNT2P09544 360 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GATA3P23771 443 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GRK5P34947 590 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CD200P41217 278 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SRP9P49458 86 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PAX2Q02962 417 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GLYATL3Q5SZD4 288 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DCAF12L2Q5VW00 463 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DRAM2Q6UX65 266 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PGAP1Q75T13 922 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PRSS45Q7RTY3 260 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MOGAT3Q86VF5 341 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HS3ST5Q8IZT8 346 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PAPD5Q8NDF8 572 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 Q8TCH9 128 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPTSSAQ969W0 71 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 KCNJ15Q99712 375 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FAM183AA6NL82 134 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 RIIAD1A6NNX1 92 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 IFNGP01579 166 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPARCP09486 303 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF3P17036 446 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 EPHA1P21709 976 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PRKXP51817 358 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MALLQ13021 153 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GINS1Q14691 196 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FAM201AQ5SY85 155 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DPY19L4Q7Z388 723 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TIGD4Q8IY51 512 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 KLHL36Q8N4N3 616 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CELF2-AS1Q8N7Q2 184 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 BCAS4Q8TDM0 211 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 RNF133Q8WVZ7 376 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPSB4Q96A44 273 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DACT3Q96B18 629 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 AMELYQ99218 206 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 NTN4Q9HB63 628 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PDP1Q9P0J1 537 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 POMPQ9Y244 141 aa10.98□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GYG2O15488 501 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GLCEO94923 617 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLC2A1P11166 492 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF12P17014 697 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HOXB6P17509 224 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CA6P23280 308 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CPT2P23786 658 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 BLVRAP53004 296 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HOXA4Q00056 320 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CDK5Q00535 292 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PAX8Q06710 450 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF154Q13106 437 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MPPED2Q15777 294 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF404Q494X3 552 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DNAL1Q4LDG9 190 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SHQ1Q6PI26 577 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MUC20Q8N307 709 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OR6K6Q8NGW6 343 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TEX47Q8TBZ9 253 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DVL3Q92997 716 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ERGIC1Q969X5 290 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TMEM246Q9BRR3 403 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 COPS4Q9BT78 406 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ABHD6Q9BV23 337 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CADM1Q9BY67 442 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CENPMQ9NSP4 180 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF319Q9P2F9 582 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PCDHB10Q9UN67 800 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 INSIG2Q9Y5U4 225 aa10.97□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CMYA5Q8N3K9 4069 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF878C9JN71 531 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 H3BN98 237 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GSC2O15499 205 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FKBP6O75344 327 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OSMP13725 252 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PRKACGP22612 351 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GSTT1P30711 240 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CD80P33681 288 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OPRL1P41146 370 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HILS1P60008 231 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FLOT2Q14254 428 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 KLF17Q5JT82 389 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PRAMEF6Q5VXH4 476 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPATC1Q76KD6 591 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPATA24Q86W54 205 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 NANPQ8TBE9 248 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 UTP4Q969X6 686 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SGK3Q96BR1 496 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 INTS14Q96SY0 518 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms