RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PDP1Q9P0J1 537 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 GPR132Q9UNW8 380 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 SETD2Q9BYW2 2564 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ARRDC5A6NEK1 342 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ANKRD65E5RJM6 399 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 C16orf97H3BN30 126 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TRAF3IP2O43734 574 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SAP30O75446 220 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 NDUFB2O95178 105 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TSPAN19P0C672 248 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GSTM3P21266 225 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 CD79BP40259 229 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 HTR2BP41595 481 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GSSP48637 474 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GZMKP49863 264 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IST1P53990 364 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 RIPPLY3P57055 190 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 RPS4XP62701 263 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 PPP2R2BQ00005 443 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TFF3Q07654 80 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SPOCK1Q08629 439 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 FAM27E3Q08E93 113 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TSPAN31Q12999 210 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TNK1Q13470 666 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 MELKQ14680 651 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 P2RY6Q15077 328 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 FBXL19-AS1Q494R0 122 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM41BQ5BJD5 291 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SMARCD3Q6STE5 483 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 Q6ZT83 130 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 NOXA1Q86UR1 476 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IGFN1Q86VF2 1251 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GPR137CQ8N3F9 429 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR9Q2Q8NGE9 314 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR6N1Q8NGY5 312 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR6X1Q8NH79 312 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 FANK1Q8TC84 345 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ORAI1Q96D31 301 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 C4orf36Q96KX1 117 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 LRR1Q96L50 414 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR2M2Q96R28 347 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 NEU1Q99519 415 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GPA33Q99795 319 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 EMC6Q9BV81 110 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 POLDIP3Q9BY77 421 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TOR3AQ9H497 397 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF556Q9HAH1 456 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 MCCC2Q9HCC0 563 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 B3GAT2Q9NPZ5 323 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ASB6Q9NWX5 421 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 STX18Q9P2W9 335 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IL20RAQ9UHF4 553 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 MGAT4BQ9UQ53 548 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SIGLEC7Q9Y286 467 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 MRPS7Q9Y2R9 242 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ARHGAP21Q5T5U3 1957 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ICE1Q9Y2F5 2266 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 HIVEP3Q5T1R4 2406 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 DOCK7Q96N67 2140 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 NCOA6Q14686 2063 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 LOC100506127A0A0U1RQW1 187 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF587BE7ETH6 402 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 G3V2T6 193 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 C19orf84I3L1E1 186 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 M0R3G1 203 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ENTPD5O75356 428 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 UPK3AO75631 287 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF432O94892 652 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IGHG1P01857 330 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF182P17025 639 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF23P17027 643 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 PRKACGP22612 351 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IL32P24001 234 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 EDNRAP25101 427 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SLC6A6P31641 620 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 UGT2B10P36537 528 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ACVR1BP36896 505 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 CSNK1A1P48729 337 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ERVK-25P63136 954 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 CSNK2BP67870 215 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ITGADQ13349 1161 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 FHL1Q13642 323 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ACKR1Q16570 336 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 RFX4Q33E94 735 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 Q3ZCU0 254 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TSPO2Q5TGU0 170 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SP5Q6BEB4 398 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF770Q6IQ21 691 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 RPL13AP3Q6NVV1 102 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 DPY19L2P2Q6ZN68 376 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM179BQ7Z7N9 219 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 AMIGO2Q86SJ2 522 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 HIPK1Q86Z02 1210 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 C20orf196Q8IYI0 205 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IZUMO1Q8IYV9 350 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 LRRC75AQ8NAA5 344 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms