RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CLEC1AQ8NC01 280 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
LDB3-207ENST00000542786 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 TTTY12Q9BZ98 90 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 EMC3Q9P0I2 261 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 IGKV1-9A0A0C4DH69 117 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 CDRT15L2A8MXV6 281 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 RAB27BO00194 218 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 SULT1C2O00338 296 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 RBBP9O75884 186 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 NDUFB6O95139 128 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 C1QBP02746 253 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 CST2P09228 141 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 ZNF20P17024 532 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 PRSS3P35030 304 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 GZMKP49863 264 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 PMPCAQ10713 525 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 HYAL4Q2M3T9 481 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 LINC00303Q3SY05 128 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 OR4C16Q8NGL9 310 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 ABHD3Q8WU67 409 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 FAM71F1Q96KD3 344 aaPredicted RBP12.43□□□□□ -0.42
LDB3-207ENST00000542786 SCPEP1Q9HB40 452 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 ABI3Q9P2A4 366 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 RAB22AQ9UL26 194 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 V9GYS6 101 aa12.43□□□□□ -0.42
LDB3-207ENST00000542786 A0A1B0GUH1 482 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 TMEM14DPA8MWL7 114 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 SYNGR3O43761 229 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 NME2P1O60361 137 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 HPXP02790 462 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 CSF1P09603 554 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 SULT1A3P0DMM9 295 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 SULT1A4P0DMN0 295 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ZNF708P17019 499 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 NME2P22392 152 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 GUCA1AP43080 201 aaPredicted RBP12.42□□□□□ -0.42
LDB3-207ENST00000542786 GALK2Q01415 458 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 RAB35Q15286 201 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 PCGF3Q3KNV8 242 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 Q5BKY6 102 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ATP1A1-AS1Q5TC04 95 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 LINC00696Q6ZRV3 163 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 UTS2BQ765I0 119 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 TMEM251Q8N6I4 163 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 DEFB124Q8NES8 71 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 OR4D10Q8NGI6 311 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 AQP3Q92482 292 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 MED28Q9H204 178 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 TAS2R8Q9NYW2 309 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ZNF224Q9NZL3 707 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 CNTRLQ7Z7A1 2325 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 OR6C6A6NF89 314 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ICMTO60725 284 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 TGM6O95932 706 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 LPLP06858 475 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 YES1P07947 543 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
LDB3-207ENST00000542786 DBHP09172 617 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 PRF1P14222 555 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 STOMP27105 288 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 MAGEA5P43359 124 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 VEGFCP49767 419 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 HGFACQ04756 655 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 MAB21L1Q13394 359 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 NCCRP1Q6ZVX7 275 aaPredicted RBP12.42□□□□□ -0.42
LDB3-207ENST00000542786 FGD2Q7Z6J4 655 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 PGAM5Q96HS1 289 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 SLC6A15Q9H2J7 730 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
LDB3-207ENST00000542786 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 ELF5Q9UKW6 265 aaPredicted RBP12.42□□□□□ -0.42
LDB3-207ENST00000542786 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
LDB3-207ENST00000542786 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 PRAF2O60831 178 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 FTH1P19P0C7X4 201 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 CXCL3P19876 107 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 CD82P27701 267 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
LDB3-207ENST00000542786 SOX8P57073 446 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 ZP1P60852 638 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 CDK10Q15131 360 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 SF3B4Q15427 424 aaKnown RBP eCLIP12.41□□□□□ -0.42
LDB3-207ENST00000542786 ZNF260Q3ZCT1 412 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 ALKBH3Q96Q83 286 aaPredicted RBP12.41□□□□□ -0.42
LDB3-207ENST00000542786 NUDT16L1Q9BRJ7 211 aaKnown RBP12.41□□□□□ -0.42
LDB3-207ENST00000542786 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms