RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 C12orf73Q69YU5 71 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 PGAP1Q75T13 922 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 SPATC1Q76KD6 591 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 BHLHE23Q8NDY6 225 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 TIMD4Q96H15 378 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 TEAD3Q99594 435 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 GCM1Q9NP62 436 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 TMEM106BQ9NUM4 274 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 TMEM100Q9NV29 134 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 OAZ3Q9UMX2 235 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 CCDC182A6NF36 153 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC2A1P11166 492 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 APOFQ13790 326 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 MRPL21Q7Z2W9 205 aaKnown RBP13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 MEGF10Q96KG7 1140 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 SIGLEC11Q96RL6 698 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 CIB1Q99828 191 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 SEMA6AQ9H2E6 1030 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF665Q9H7R5 613 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 LPAR3Q9UBY5 353 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 DNHD1Q96M86 4753 aa13.04□□□□□ -0.32
ECHDC2-223ENST00000542552 CD300LBA8K4G0 201 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 IGHV2-70P01814 119 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 IGHV2-5P01817 119 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 APOC1P02654 83 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 LYNP07948 512 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 ALOX5APP20292 161 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 CX3CR1P49238 355 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 AADACL4Q5VUY2 407 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 ZFP1Q6P2D0 407 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 CELF2-AS1Q8N7Q2 184 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 PKP2Q99959 881 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 BEX2Q9BXY8 128 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 GABARAPL3Q9BY60 117 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 YIPF3Q9GZM5 350 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 OPA3Q9H6K4 179 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 ENOPH1Q9UHY7 261 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
ECHDC2-223ENST00000542552 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 F5H5P2 479 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 M0R129 80 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 XRCC2O43543 280 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 HLA-DPB1P04440 258 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 MSMBP08118 114 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 H2BFMP0C1H6 154 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 FAM157CP0CG43 387 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 HSD11B1P28845 292 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 POLR2IP36954 125 aaKnown RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 CD200P41217 278 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 GATA4P43694 442 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SRP9P49458 86 aaKnown RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 MMP16P51512 607 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 ZNF121P58317 390 aaPredicted RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 RPS7P62081 194 aaKnown RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 MAB21L1Q13394 359 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 CR1LQ2VPA4 569 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 PEG10Q86TG7 708 aaKnown RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 TCEANCQ8N8B7 351 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 OR52H1Q8NGJ2 320 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 TMEM163Q8TC26 289 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 THEM6Q8WUY1 208 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SPRYD4Q8WW59 207 aaPredicted RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SGK3Q96BR1 496 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SLC22A4Q9H015 551 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SHARPINQ9H0F6 387 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 SP140LQ9H930 580 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 MRPL15Q9P015 296 aaKnown RBP13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 ZNF319Q9P2F9 582 aa13.02□□□□□ -0.33
ECHDC2-223ENST00000542552 COL6A5A8TX70 2615 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 TMEM178BH3BS89 294 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 GMDSO60547 372 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 PTBP3O95758 552 aaKnown RBP13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 ANXA2P07355 339 aaKnown RBP13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 CA6P23280 308 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 HCCSP53701 268 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 ZMYND11Q15326 602 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 NXNL2Q5VZ03 156 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 DEGS2Q6QHC5 323 aa13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 MEPCEQ7L2J0 689 aaKnown RBP13.01□□□□□ -0.33
ECHDC2-223ENST00000542552 BCDIN3DQ7Z5W3 292 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms