RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FLRT1Q9NZU1 646 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF230Q9UIE0 474 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF107Q9UII5 783 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-219ENST00000542112 SLC45A2Q9UMX9 530 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 FLVCR2Q9UPI3 526 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 LRP12Q9Y561 859 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 DNAJC15Q9Y5T4 150 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 SNX10Q9Y5X0 201 aa3.89□□□□□ -1.79
SNHG1-219ENST00000542112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-219ENST00000542112 KIAA1217Q5T5P2 1943 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TRBV5-3A0A0A0MS03 114 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GXYLT2A0PJZ3 443 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CD8B2A6NJW9 211 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 OR5B21A6NL26 309 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 FAM183AA6NL82 134 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 E7EQ34 232 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 FAM227AF5H4B4 570 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 F5H5T6 163 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 G3V4G9 280 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 H3BN98 237 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 J3QR89 54 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 M0R296 226 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ARPC1BO15143 372 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SLC16A5O15375 505 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 RBFOX2O43251 390 aaKnown RBP eCLIP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 B4GALT2O60909 372 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 NME6O75414 186 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ERAL1O75616 437 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SCGNO76038 276 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 LRATO95237 230 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TRUB2O95900 331 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CH25HO95992 272 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 IFNA5P01569 189 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 IGHG4P01861 327 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GAPDHP04406 335 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ATP1B1P05026 303 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ARG1P05089 322 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 DCNP07585 359 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 RAB40ALP0C0E4 278 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 OR5G3P0C626 314 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SLC35G6P0C7Q6 338 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TRGC1P0CF51 173 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 EBLN1P0CF75 366 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 PET100P0DJ07 73 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 LIPCP11150 499 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 HOXB2P14652 356 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GPD1P21695 349 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ACHEP22303 614 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 EDNRBP24530 442 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 S100GP29377 79 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 BUD31P41223 144 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SOX3P41225 446 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GPR12P47775 334 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GABRA2P47869 451 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CXCR3P49682 368 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 THBS3P49746 956 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 FLT3LGP49771 235 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 MEOX1P50221 254 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 NPY4RP50391 375 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GZMMP51124 257 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 RND2P52198 227 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 LBX1P52954 281 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 PIGPP57054 158 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TAS2R43P59537 309 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 UBE2NP61088 152 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TBPL1P62380 186 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 DYNLT1P63172 113 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 PAFAH1B2P68402 229 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 RBBP4Q09028 425 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TNFAIP1Q13829 316 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SURF1Q15526 300 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TEAD2Q15562 447 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ELAVL1Q15717 326 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ZBTB6Q15916 424 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 MST1LQ2TV78 715 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM249Q2WGJ8 235 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SNAI3Q3KNW1 292 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CEACAM21Q3KPI0 293 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 C19orf54Q5BKX5 351 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SPIN3Q5JUX0 258 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 PRR31Q5SQ13 230 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 OR4A47Q6IF82 309 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TMEM205Q6UW68 189 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF562Q6V9R5 426 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TEX43Q6ZNM6 134 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 DNM1P46Q6ZS02 220 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 TMPPEQ6ZT21 453 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CLEC20AQ6ZU45 233 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 MED25Q71SY5 747 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SLC36A1Q7Z2H8 476 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SLC35E3Q7Z769 313 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 DEFB132Q7Z7B7 95 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 CPOQ8IVL8 374 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 SP8Q8IXZ3 490 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 LAS2Q8IYD9 372 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 BCL6BQ8N143 479 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-219ENST00000542112 GALNT16Q8N428 558 aa3.88□□□□□ -1.79
SNHG1-219ENST00000542112 ACOT4Q8N9L9 421 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms