RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SMURF1Q9HCE7 757 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 CAB39Q9Y376 341 aaPredicted RBP22.13■■□□□ 1.13
CHFR-218ENST00000540963 KPTNQ9Y664 436 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 OOEPA6NGQ2 149 aa22.12■■□□□ 1.13
CHFR-218ENST00000540963 SOCS2O14508 198 aa22.12■■□□□ 1.13
CHFR-218ENST00000540963 SFRP4Q6FHJ7 346 aaPredicted RBP22.12■■□□□ 1.13
CHFR-218ENST00000540963 DPY19L2P2Q6ZN68 376 aa22.12■■□□□ 1.13
CHFR-218ENST00000540963 PTCHD4Q6ZW05 846 aa22.12■■□□□ 1.13
CHFR-218ENST00000540963 FAM110DQ8TAY7 271 aaPredicted RBP22.12■■□□□ 1.13
CHFR-218ENST00000540963 AP3M1Q9Y2T2 418 aa22.12■■□□□ 1.13
CHFR-218ENST00000540963 IMPA2O14732 288 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 PPP1R3DO95685 299 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 CSF1P09603 554 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 CDKN2AP42771 156 aaKnown RBP22.11■■□□□ 1.13
CHFR-218ENST00000540963 RPS6KA3P51812 740 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 SLC7A2P52569 658 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 OR8B8Q15620 311 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 IFI44LQ53G44 452 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 HIST2H2BDQ6DRA6 164 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 DHRS7BQ6IAN0 325 aaPredicted RBP22.11■■□□□ 1.13
CHFR-218ENST00000540963 METAP1DQ6UB28 335 aaPredicted RBP22.11■■□□□ 1.13
CHFR-218ENST00000540963 SLCO4A1Q96BD0 722 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 ATF6BQ99941 703 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 KAAG1Q9UBP8 84 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 FAM96BQ9Y3D0 163 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 IER3IP1Q9Y5U9 82 aa22.11■■□□□ 1.13
CHFR-218ENST00000540963 A0A1B0GVI7 797 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 BTBD17A6NE02 478 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 C3orf80F5H4A9 247 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 F5H5K5 113 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 CXCR6O00574 342 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 TGFBR2P37173 567 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 GSK3BP49841 420 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 ARF6P62330 175 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 MEP1BQ16820 701 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 CDONQ4KMG0 1287 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 CORO6Q6QEF8 472 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 CBLL1Q75N03 491 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 BTN2A1Q7KYR7 527 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 MRPL21Q7Z2W9 205 aaKnown RBP22.1■■□□□ 1.13
CHFR-218ENST00000540963 GALNT4Q8N4A0 578 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 PIP4P2Q8N4L2 257 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 SPERTQ8NA61 448 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 SLC26A10Q8NG04 563 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 SLC7A13Q8TCU3 470 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 PITX2Q99697 317 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 MYLK2Q9H1R3 596 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 CNTD2Q9H8S5 307 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 VPREB3Q9UKI3 123 aa22.1■■□□□ 1.13
CHFR-218ENST00000540963 IGLV1-36A0A0B4J1U3 117 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 LCATP04180 440 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 FBP1P09467 338 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 CA6P23280 308 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 CENPAP49450 140 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 BEAN1Q3B7T3 259 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 SLC36A3Q495N2 470 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 KPRPQ5T749 579 aaPredicted RBP22.09■■□□□ 1.13
CHFR-218ENST00000540963 SLC18B1Q6NT16 456 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 CYP4Z1Q86W10 505 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 FAM46AQ96IP4 442 aaKnown RBP22.09■■□□□ 1.13
CHFR-218ENST00000540963 ADAT1Q9BUB4 502 aaKnown RBP22.09■■□□□ 1.13
CHFR-218ENST00000540963 ZNRD1Q9P1U0 126 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 RPUSD1Q9UJJ7 312 aaKnown RBP22.09■■□□□ 1.13
CHFR-218ENST00000540963 AURKCQ9UQB9 309 aa22.09■■□□□ 1.13
CHFR-218ENST00000540963 A0A1W2PRQ8 180 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 CD300LBA8K4G0 201 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 DCTN6O00399 190 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 DVL1O14640 695 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 PRSS12P56730 875 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 MZT1Q08AG7 82 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 TRAP1Q12931 704 aaKnown RBP22.08■■□□□ 1.13
CHFR-218ENST00000540963 DGCR6Q14129 220 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 CFAP77Q6ZQR2 320 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 REC114Q7Z4M0 266 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 TSSK2Q96PF2 358 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 MRPL15Q9P015 296 aaKnown RBP22.08■■□□□ 1.13
CHFR-218ENST00000540963 B9D1Q9UPM9 204 aa22.08■■□□□ 1.13
CHFR-218ENST00000540963 PLXNB1O43157 2135 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 ALX3O95076 343 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 NCK1P16333 377 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 TPTEP56180 551 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 TEX36Q5VZQ5 186 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 HACD2Q6Y1H2 254 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.07■■□□□ 1.12
CHFR-218ENST00000540963 BOLLQ8N9W6 283 aaKnown RBP22.07■■□□□ 1.12
CHFR-218ENST00000540963 OR2AJ1Q8NGZ0 328 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 RSRC1Q96IZ7 334 aaKnown RBP22.07■■□□□ 1.12
CHFR-218ENST00000540963 HOPXQ9BPY8 73 aaPredicted RBP22.07■■□□□ 1.12
CHFR-218ENST00000540963 RASSF4Q9H2L5 321 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 MED4Q9NPJ6 270 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 CYB5R1Q9UHQ9 305 aa22.07■■□□□ 1.12
CHFR-218ENST00000540963 ZNF816-ZNF321PA0A0X1KG74 233 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 OR10H3O60404 316 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 ZNF682O95780 498 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 LHBP01229 141 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 GYPAP02724 150 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 OMPP47874 163 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 FXYD6P3P58550 94 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 HOXA4Q00056 320 aaPredicted RBP22.06■■□□□ 1.12
CHFR-218ENST00000540963 GUCA2AQ02747 115 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms