RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 IGHV3-64DA0A0J9YX35 117 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 A0A0U1RQK1 487 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 LRRC30A6NM36 301 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 H0YJX3 145 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 CDC42EP2O14613 210 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 IMPA2O14732 288 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ACOT8O14734 319 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 FFAR1O14842 300 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ANGPT2O15123 496 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 RER1O15258 196 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 FAM20BO75063 409 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 TSPAN9O75954 239 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 LIPFP07098 398 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 CD14P08571 375 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 IFI30P13284 250 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 GUCA1AP43080 201 aaPredicted RBP6.03□□□□□ -1.44
YBX3-209ENST00000540747 OR1E2P47887 323 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 SLC9A3P48764 834 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 NPY4RP50391 375 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 PRKCDQ05655 676 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 COX10Q12887 443 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 NFYCQ13952 458 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 RABL3Q5HYI8 236 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 OTPQ5XKR4 325 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 NANOGP8Q6NSW7 305 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 DHFR2Q86XF0 187 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 NRMQ8IXM6 262 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 OFCC1Q8IZS5 231 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 PIP4P2Q8N4L2 257 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 OR13C2Q8NGS9 318 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 OR51A7Q8NH64 312 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 TBC1D15Q8TC07 691 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 APOBEC3DQ96AK3 386 aaPredicted RBP6.03□□□□□ -1.44
YBX3-209ENST00000540747 ASB9Q96DX5 294 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 Q96M85 177 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ZNF583Q96ND8 569 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ZNF582Q96NG8 517 aaPredicted RBP6.03□□□□□ -1.44
YBX3-209ENST00000540747 WDFY2Q96P53 400 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 GPX7Q96SL4 187 aaPredicted RBP6.03□□□□□ -1.44
YBX3-209ENST00000540747 COQ7Q99807 217 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 PCGF1Q9BSM1 259 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 TCF7L1Q9HCS4 588 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 SPAG4Q9NPE6 437 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 ACOXLQ9NUZ1 547 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 VSX1Q9NZR4 365 aaPredicted RBP6.03□□□□□ -1.44
YBX3-209ENST00000540747 TMCC3Q9ULS5 477 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 LHFPL6Q9Y693 200 aa6.03□□□□□ -1.44
YBX3-209ENST00000540747 A0A087WUU8 490 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 SMIM31A0A1B0GVY4 71 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 G3V4G9 280 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 LGALS8O00214 317 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 TOX4O94842 621 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 HLA-DPB1P04440 258 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 ANOS1P23352 680 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 RPL5P46777 297 aaKnown RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 FXYD6P3P58550 94 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 ST3GAL3Q11203 375 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 DYNC1I2Q13409 638 aaKnown RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 GK2Q14410 553 aaPredicted RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 MPPED2Q15777 294 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 C2orf68Q2NKX9 166 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 SPATS1Q496A3 300 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 CYBRD1Q53TN4 286 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 C1orf94Q6P1W5 598 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 TMPRSS11FQ6ZWK6 438 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 OAFQ86UD1 273 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 GLB1L2Q8IW92 636 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 MICU2Q8IYU8 434 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 BHLHE23Q8NDY6 225 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 C19orf18Q8NEA5 215 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 OR8J3Q8NGG0 315 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 OR5L1Q8NGL2 311 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 FAM110DQ8TAY7 271 aaPredicted RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 EME1Q96AY2 570 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 DUS3LQ96G46 650 aaKnown RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 MRPS26Q9BYN8 205 aaKnown RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 HDHD2Q9H0R4 259 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 MUC13Q9H3R2 512 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 NRIP3Q9NQ35 241 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 PAPOLBQ9NRJ5 636 aaKnown RBP6.02□□□□□ -1.45
YBX3-209ENST00000540747 TMEM100Q9NV29 134 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 ZNRD1Q9P1U0 126 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 SNX13Q9Y5W8 968 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 PLXNB1O43157 2135 aa6.02□□□□□ -1.45
YBX3-209ENST00000540747 IGLV1-36A0A0B4J1U3 117 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 MEGF11A6BM72 1044 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 AQP12BA6NM10 295 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 EFCAB9A8MZ26 197 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 C3orf80F5H4A9 247 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 DCTN6O00399 190 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 SLC16A7O60669 478 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 PTP4A3O75365 173 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 GMNNO75496 209 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 KHDRBS3O75525 346 aaKnown RBP6.01□□□□□ -1.45
YBX3-209ENST00000540747 ALX3O95076 343 aa6.01□□□□□ -1.45
YBX3-209ENST00000540747 TNFAIP8O95379 198 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms