RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 ZDHHC13Q8IUH4 622 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 LINC00346Q8IVM7 164 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 ZNF101Q8IZC7 436 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 PARP8Q8N3A8 854 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 ICA1LQ8NDH6 482 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 OR1J2Q8NGS2 313 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 OR2T4Q8NH00 348 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 SLC7A6Q92536 515 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 RDH5Q92781 318 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 RAB3IPQ96QF0 476 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 MRPL37Q9BZE1 423 aaKnown RBP7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 C1orf198Q9H425 327 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 WDR76Q9H967 626 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 CDH20Q9HBT6 801 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 SLC25A19Q9HC21 320 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 DYNLRB1Q9NP97 96 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 PAPOLBQ9NRJ5 636 aaKnown RBP7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 PLEK2Q9NYT0 353 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 OPN4Q9UHM6 478 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 CYB5R1Q9UHQ9 305 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 NUP50Q9UKX7 468 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 OAZ3Q9UMX2 235 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 WNK2Q9Y3S1 2297 aa7.48□□□□□ -1.21
TRAPPC1-202ENST00000540486 SAC3D1A6NKF1 404 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 WNT9BO14905 357 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 SGCEO43556 437 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CLPTM1O96005 669 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 HLA-DQA2P01906 255 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 HMGN1P05114 100 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 DBHP09172 617 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 RAD52P43351 418 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 GDI2P50395 445 aaKnown RBP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 ESRRGP62508 458 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 GALK2Q01415 458 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 SCRN3Q0VDG4 424 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 ZSCAN26Q16670 478 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PCK2Q16822 640 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 TMEM255AQ5JRV8 349 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 ELFN2Q5R3F8 820 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 ZFP1Q6P2D0 407 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PLBD1Q6P4A8 553 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CFAP77Q6ZQR2 320 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 SPATC1Q76KD6 591 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 NAA40Q86UY6 237 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CPOQ8IVL8 374 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PROKR2Q8NFJ6 384 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 GJC3Q8NFK1 279 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 OR10S1Q8NGN2 331 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 OR1F12Q8NHA8 337 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 FAM110DQ8TAY7 271 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 DNAJC9Q8WXX5 260 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 TAF15Q92804 592 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PPP1R14AQ96A00 147 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 RAB39BQ96DA2 213 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 C4orf45Q96LM5 186 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 SLC29A1Q99808 456 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CIB1Q99828 191 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 OR51B6Q9H340 312 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 PNRC2Q9NPJ4 139 aaKnown RBP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 HINT3Q9NQE9 182 aaKnown RBP7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 KRT84Q9NSB2 600 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 TVP23BQ9NYZ1 205 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CMAHPQ9Y471 501 aa7.47□□□□□ -1.21
TRAPPC1-202ENST00000540486 CLPSL1A2RUU4 121 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 C5orf63A6NC05 138 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 OR6C6A6NF89 314 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 RIIAD1A6NNX1 92 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZAR1LA6NP61 321 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 E9PQ18 207 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZNF593O00488 134 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 PPIHO43447 177 aaKnown RBP7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 PRKYO43930 277 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 DOK2O60496 412 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 GLCEO94923 617 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 TSPAN15O95858 294 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 IFNGP01579 166 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 CRYBA1P05813 215 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 ADRA2AP08913 450 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZNF250P15622 560 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 SELEP16581 610 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZNF3P17036 446 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLC2A5P22732 501 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 COL8A2P25067 703 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 FMO3P31513 532 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 EVX1P49640 407 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 MRPS11P82912 194 aaKnown RBP7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 COL10A1Q03692 680 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 GABPB1Q06547 395 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 SNAPC1Q16533 368 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 KRTAP27-1Q3LI81 207 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 TEX30Q5JUR7 227 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLX4IPQ5VYV7 408 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 RGS7BPQ6MZT1 257 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 TMEM154Q6P9G4 183 aa7.46□□□□□ -1.22
TRAPPC1-202ENST00000540486 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms