RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 C2orf50Q96LR7 162 aa10□□□□□ -0.81
PBX1-212ENST00000540236 MTHFD2LQ9H903 347 aaPredicted RBP10□□□□□ -0.81
PBX1-212ENST00000540236 TMEM9BQ9NQ34 198 aa10□□□□□ -0.81
PBX1-212ENST00000540236 PRAMEF27A3QJZ7 478 aa10□□□□□ -0.81
PBX1-212ENST00000540236 PLPP1O14494 284 aa10□□□□□ -0.81
PBX1-212ENST00000540236 PRAMEF9Q5VWM5 478 aa10□□□□□ -0.81
PBX1-212ENST00000540236 KLHDC8AQ8IYD2 350 aa10□□□□□ -0.81
PBX1-212ENST00000540236 CMTM8Q8IZV2 173 aa10□□□□□ -0.81
PBX1-212ENST00000540236 EID2Q8N6I1 236 aa10□□□□□ -0.81
PBX1-212ENST00000540236 KLK13Q9UKR3 277 aa10□□□□□ -0.81
PBX1-212ENST00000540236 SMIM35A0A1B0GVV1 85 aa10□□□□□ -0.81
PBX1-212ENST00000540236 HSD17B6O14756 317 aa10□□□□□ -0.81
PBX1-212ENST00000540236 HOXA2O43364 376 aa10□□□□□ -0.81
PBX1-212ENST00000540236 ZFPL1O95159 310 aa10□□□□□ -0.81
PBX1-212ENST00000540236 CSTBP04080 98 aaKnown RBP10□□□□□ -0.81
PBX1-212ENST00000540236 OR5G3P0C626 314 aa10□□□□□ -0.81
PBX1-212ENST00000540236 UBE2G2P60604 165 aa10□□□□□ -0.81
PBX1-212ENST00000540236 RPS4XP62701 263 aaKnown RBP10□□□□□ -0.81
PBX1-212ENST00000540236 HSF1Q00613 529 aa10□□□□□ -0.81
PBX1-212ENST00000540236 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
PBX1-212ENST00000540236 BCL2L2Q92843 193 aaPredicted RBP10□□□□□ -0.81
PBX1-212ENST00000540236 LPAR4Q99677 370 aa10□□□□□ -0.81
PBX1-212ENST00000540236 ZNF426Q9BUY5 554 aa10□□□□□ -0.81
PBX1-212ENST00000540236 RGPD3A6NKT7 1758 aaPredicted RBP10□□□□□ -0.81
PBX1-212ENST00000540236 RGPD4Q7Z3J3 1758 aa10□□□□□ -0.81
PBX1-212ENST00000540236 CRHP06850 196 aa10□□□□□ -0.81
PBX1-212ENST00000540236 NDUFS1P28331 727 aa10□□□□□ -0.81
PBX1-212ENST00000540236 OR10J1P30954 320 aa10□□□□□ -0.81
PBX1-212ENST00000540236 CDCP2Q5VXM1 449 aa10□□□□□ -0.81
PBX1-212ENST00000540236 SLC18B1Q6NT16 456 aa10□□□□□ -0.81
PBX1-212ENST00000540236 ADGRE4PQ86SQ3 457 aa10□□□□□ -0.81
PBX1-212ENST00000540236 PRR22Q8IZ63 422 aa10□□□□□ -0.81
PBX1-212ENST00000540236 C2orf15Q8WU43 125 aaKnown RBP10□□□□□ -0.81
PBX1-212ENST00000540236 PLEKHJ1Q9NW61 149 aa10□□□□□ -0.81
PBX1-212ENST00000540236 KLHL13Q9P2N7 655 aa10□□□□□ -0.81
PBX1-212ENST00000540236 H7BYZ3 331 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 PPP1CCP36873 323 aaKnown RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 COL5A1-AS1Q5SY13 56 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 FAM78BQ5VT40 261 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 FAHD2BQ6P2I3 314 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 WFDC8Q8IUA0 241 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TMEM229BQ8NBD8 167 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 FAHD2AQ96GK7 314 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TAAR9Q96RI9 348 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SMIM7Q9BQ49 75 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SOSTQ9BQB4 213 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 KCNS2Q9ULS6 477 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 WSB1Q9Y6I7 421 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TTC3P53804 2025 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 F6UZH7 168 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SLC16A5O15375 505 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 B4GALT2O60909 372 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 GLCEO94923 617 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 DDAH2O95865 285 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 PEX11BO96011 259 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HPNP05981 417 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 CD70P32970 193 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 MFGE8Q08431 387 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 NUDT10Q8NFP7 164 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 CADM4Q8NFZ8 388 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SNIP1Q8TAD8 396 aaKnown RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 SEBOXQ9HB31 216 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 TRAV8-7A0A075B6U6 113 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 RNF222A6NCQ9 220 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 CST4P01036 141 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 ZNF888P0CJ79 500 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 MESTQ5EB52 335 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TSPO2Q5TGU0 170 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SLCO4C1Q6ZQN7 724 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TRAM1L1Q8N609 369 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SLC16A11Q8NCK7 471 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 Q8NFD4 153 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 TP53TG5Q9Y2B4 290 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 ALS2Q96Q42 1657 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 M0QZK8 103 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 GGCTO75223 188 aaKnown RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 WISP3O95389 354 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 CSTAP01040 98 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 PDGFBP01127 241 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 NOVA1P51513 510 aaKnown RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 ATP6V1FQ16864 119 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 SLC36A1Q7Z2H8 476 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 IL22RA1Q8N6P7 574 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 ZNF552Q9H707 407 aaPredicted RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 MRPL17Q9NRX2 175 aaKnown RBP9.99□□□□□ -0.81
PBX1-212ENST00000540236 SEMA5BQ9P283 1151 aa9.99□□□□□ -0.81
PBX1-212ENST00000540236 KLF2Q9Y5W3 355 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms