RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 GLI4P10075 376 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 CDH26Q8IXH8 852 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
BNIP3-202ENST00000540159 A0A0A6YYD4 124 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 RFPL4AA6NLU0 287 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 RFPL4AL1F8VTS6 287 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 WDPCPO95876 746 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 RAB3AP20336 220 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 MPGP29372 298 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 AFF3P51826 1226 aaKnown RBP12.1□□□□□ -0.47
BNIP3-202ENST00000540159 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 C1QL2Q7Z5L3 287 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 DTX1Q86Y01 620 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 CYB5R1Q9UHQ9 305 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 KIF25Q9UIL4 384 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 COL4A2P08572 1712 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 A0A1W2PQM1 296 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 KANTRA0A1W2PQU2 76 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 DISC1C4P0D8 188 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 DBHP09172 617 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 GLULP15104 373 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 LAP3P28838 519 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
BNIP3-202ENST00000540159 CLDN17P56750 224 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 CCL7P80098 99 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 DHODHQ02127 395 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 SMAD4Q13485 552 aaKnown RBP12.1□□□□□ -0.47
BNIP3-202ENST00000540159 MFSD8Q8NHS3 518 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 UCK1Q9HA47 277 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
BNIP3-202ENST00000540159 OR14I1A6ND48 311 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 H3BUI4 141 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 UBCP0CG48 685 aaKnown RBP12.09□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF43P17038 809 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 EPHA4P54764 986 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 CHAF1BQ13112 559 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 PLAC9Q5JTB6 97 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR5D14Q8NGL3 314 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR5M8Q8NGP6 311 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR4K15Q8NH41 348 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
BNIP3-202ENST00000540159 BOD1L1Q8NFC6 3051 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 A6NIZ1 184 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SSX5O60225 188 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 RAD51DO75771 328 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SERPINA2P20848 420 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 RAP1BP61224 184 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 RAP1AP62834 184 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM185AQ8NFB2 350 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR4K17Q8NGC6 315 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR5M9Q8NGP3 310 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 PIGTQ969N2 578 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 WDR77Q9BQA1 342 aaPredicted RBP12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SLC25A21Q9BQT8 299 aaPredicted RBP12.09□□□□□ -0.47
BNIP3-202ENST00000540159 PHF7Q9BWX1 381 aaPredicted RBP12.09□□□□□ -0.47
BNIP3-202ENST00000540159 TMPRSS13Q9BYE2 586 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SDHAF3Q9NRP4 125 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 C9orf170A2RU37 121 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 MEGF11A6BM72 1044 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 LDLRAD4O15165 306 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 KNG1P01042 644 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 PGAM2P15259 253 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 FOSL2P15408 326 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 PNLIPP16233 465 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SPINK2P20155 84 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SERPINF1P36955 418 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 MICBQ29980 383 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SLC22A24Q8N4F4 322 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 SPERTQ8NA61 448 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 DEFB126Q9BYW3 111 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
BNIP3-202ENST00000540159 OR5H15A6NDH6 313 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 F12P00748 615 aaPredicted RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 PATE4P0C8F1 98 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 NAGAP17050 411 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 CX3CR1P49238 355 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 PLPPR5Q32ZL2 321 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 RHBDD2Q6NTF9 364 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms