RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SELENOVP59797 346 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ISL1P61371 349 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ACTC1P68032 377 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ACTA1P68133 377 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 EGR3Q06889 387 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 PSG7Q13046 419 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 GK2Q14410 553 aaPredicted RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 HLXQ14774 488 aaPredicted RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 SMN1Q16637 294 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ALKBH6Q3KRA9 238 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 Q5PR19 223 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 GLYATL3Q5SZD4 288 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF684Q5T5D7 378 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 DEGS2Q6QHC5 323 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF322Q6U7Q0 402 aaPredicted RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 IZUMO2Q6UXV1 221 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 KRT77Q7Z794 578 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF679Q8IYX0 411 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 C8orf59Q8N0T1 100 aaPredicted RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ZCCHC24Q8N2G6 241 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 OR5L1Q8NGL2 311 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 OR2T27Q8NH04 317 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 OR2AE1Q8NHA4 323 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 CNIH3Q8TBE1 160 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 FBLIM1Q8WUP2 373 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 GTF3AQ92664 365 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 TFAP2CQ92754 450 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 LGALS12Q96DT0 336 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 TRMT61AQ96FX7 289 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 Q96MT0 163 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 OR8B4Q96RC9 309 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 TBX5Q99593 518 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 MROQ9BYG7 248 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 VCX3BQ9H321 246 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 NIPAL2Q9H841 368 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 FAM206AQ9NX38 181 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 SLCO1C1Q9NYB5 712 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 TAAR3PQ9P1P4 343 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 CGGBP1Q9UFW8 167 aaPredicted RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 MRM2Q9UI43 246 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 EXOGQ9Y2C4 368 aaKnown RBP5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 HSPE1-MOB4S4R3N1 261 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 PMF1-BGLAPU3KQ54 211 aa5.96□□□□□ -1.46
LPCAT3-209ENST00000540060 USF3Q68DE3 2245 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ARID1AO14497 2285 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ZSCAN5BA6NJL1 495 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 C17orf100A8MU93 164 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MAGEB4O15481 346 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 XRCC2O43543 280 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 TIMM8AO60220 97 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF254O75437 659 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 NCR1O76036 304 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 LY6HO94772 140 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ANXA2P07355 339 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ADH4P08319 380 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 NAT2P11245 290 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 FLNAP21333 2647 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 DCTDP32321 178 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ATP6V1E1P36543 226 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 RIDAP52758 137 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 EFNA4P52798 201 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF85Q03923 595 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF92Q03936 586 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MFGE8Q08431 387 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 RAB40BQ12829 278 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MALLQ13021 153 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 C6orf52Q5T4I8 152 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 LAIR2Q6ISS4 152 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 PRSS57Q6UWY2 283 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 SPNS3Q6ZMD2 512 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 Q6ZR03 302 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 DNM1P46Q6ZS02 220 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 FAM57BQ71RH2 274 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 WFDC11Q8NEX6 87 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 OR10H4Q8NGA5 316 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 OR8B12Q8NGG6 310 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 SNX33Q8WV41 574 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 SPSB4Q96A44 273 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 HAVCR1Q96D42 359 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 CMBLQ96DG6 245 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 VRK1Q99986 396 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 TPK1Q9H3S4 243 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MS4A5Q9H3V2 200 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 OPA3Q9H6K4 179 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 SP140LQ9H930 580 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 BARX1Q9HBU1 254 aaPredicted RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 AMBNQ9NP70 447 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MRPS18AQ9NVS2 196 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 ZNF319Q9P2F9 582 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 PURGQ9UJV8 347 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 IKZF2Q9UKS7 526 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MYRFQ9Y2G1 1151 aa5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 RPL36Q9Y3U8 105 aaKnown RBP5.95□□□□□ -1.46
LPCAT3-209ENST00000540060 MTORP42345 2549 aa5.94□□□□□ -1.46
LPCAT3-209ENST00000540060 TLN2Q9Y4G6 2542 aa5.94□□□□□ -1.46
LPCAT3-209ENST00000540060 hCG_38984A0A1B0GV85 526 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms