RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PTAFRP25105 342 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RGS6P49758 472 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 BSPH1Q075Z2 132 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SPOCK1Q08629 439 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ZNF544Q6NX49 715 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RFPL4BQ6ZWI9 263 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RDH10Q8IZV5 341 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GHSRQ92847 366 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MARVELD3Q96A59 401 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 APOBEC3DQ96AK3 386 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TBCCD1Q9NVR7 557 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CRIM1Q9NZV1 1036 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 STARD10Q9Y365 291 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CSMD1Q96PZ7 3565 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SMPD2O60906 423 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PEX19P40855 299 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 KIR2DL3P43628 341 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GPR50Q13585 617 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 BLMHQ13867 455 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 NCMAPQ5T1S8 102 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 DMRTC2Q8IXT2 367 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ACBD4Q8NC06 268 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR52H1Q8NGJ2 320 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR13F1Q8NGS4 319 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR5AK2Q8NH90 309 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ABHD4Q8TB40 342 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SP140LQ9H930 580 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 EIF3KQ9UBQ5 218 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SF3B6Q9Y3B4 125 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 FBN2P35556 2912 aa16.32■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TMEM212A6NML5 194 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ATP6V1G2-DDX39BF2Z307 99 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 P2RY10O00398 339 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CCRL2O00421 344 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CASKO14936 926 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CD1AP06126 327 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PRF1P14222 555 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PCSK6P29122 969 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TGFBR2P37173 567 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 UCP2P55851 309 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GFOD2Q3B7J2 385 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GLYATL3Q5SZD4 288 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ZNF676Q8N7Q3 588 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR2AE1Q8NHA4 323 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR51E1Q8TCB6 317 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SGK3Q96BR1 496 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR10A2Q9H208 303 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 POFUT1Q9H488 388 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SLC24A3Q9HC58 644 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PRR14LQ5THK1 2151 aa16.31■□□□□ 0.2
TNFRSF1A-213ENST00000540022 H3BSH0 61 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ABCD4O14678 606 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SIAH2O43255 324 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 IGLV3-1P01715 115 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ERVS71-1P61550 626 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RPS25P62851 125 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ZNF704Q6ZNC4 412 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR13C5Q8NGS8 318 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR10AC1Q8NH08 325 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RGP1Q92546 391 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TMEM203Q969S6 136 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 YIPF6Q96EC8 236 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 LYZL4Q96KX0 146 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 KCNS3Q9BQ31 491 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SOX7Q9BT81 388 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TMED9Q9BVK6 235 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 COMMD4Q9H0A8 199 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ESRP2Q9H6T0 727 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 NDUFB11Q9NX14 153 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ZNF281Q9Y2X9 895 aa16.3■□□□□ 0.2
TNFRSF1A-213ENST00000540022 A0A0U1RQV5 110 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 A0A1B0GTI1 187 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 DEFB108AA8MXU0 73 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 J3QW42 95 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CD36P16671 472 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 NR4A1P22736 598 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ZNF92Q03936 586 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 BEX5Q5H9J7 111 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RADILQ96JH8 1075 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GPR84Q9NQS5 396 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 XRCC2O43543 280 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GPRIN2O60269 458 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ATE1O95260 518 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ISG15P05161 165 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 UBCP0CG48 685 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CD53P19397 219 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RAD52P43351 418 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PRSS12P56730 875 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PPP1CBP62140 327 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RPS11P62280 158 aaKnown RBP eCLIP16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SPATA46Q5T0L3 261 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 TMEM244Q5VVB8 128 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GPR141Q7Z602 305 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SATL1Q86VE3 508 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR51A4Q8NGJ6 313 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR1J1Q8NGS3 322 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms