RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 HIST2H3PS2Q5TEC6 136 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 C1orf122Q6ZSJ8 110 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 HIST2H3AQ71DI3 136 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 GJC3Q8NFK1 279 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 Q96M85 177 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 SLC22A4Q9H015 551 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 HDHD2Q9H0R4 259 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 MYLK2Q9H1R3 596 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 FOXJ3Q9UPW0 622 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 COA3Q9Y2R0 106 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 ADAM18Q9Y3Q7 739 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 EFCAB9A8MZ26 197 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 NPFFO15130 113 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 GMDSO60547 372 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 PAHP00439 452 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 CD14P08571 375 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 CA6P23280 308 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 IFNA8P32881 189 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 SLC9A3P48764 834 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 PRSS12P56730 875 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 EMX1Q04741 257 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 CCDC121Q6ZUS5 278 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 CALHM3Q86XJ0 350 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 FAM90A1Q86YD7 464 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 NRMQ8IXM6 262 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 FAM156AQ8NDB6 213 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 PPP1R35Q8TAP8 253 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 SPRYD4Q8WW59 207 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 ST8SIA4Q92187 359 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 SLCO4A1Q96BD0 722 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 ITPKCQ96DU7 683 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 RERGLQ9H628 205 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 SAR1AQ9NR31 198 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 MRGBPQ9NV56 204 aa9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 NOP16Q9Y3C1 178 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-209ENST00000539982 ANGPT2O15123 496 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 IFNA14P01570 189 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 ACSM4P0C7M7 580 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 POU4F2Q12837 409 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 MALLQ13021 153 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 NFYCQ13952 458 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 KRT72Q14CN4 511 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 KRTAP27-1Q3LI81 207 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 PGAP1Q75T13 922 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 RNF113BQ8IZP6 322 aaKnown RBP9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 CMTM4Q8IZR5 234 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 GCSAMQ8N6F7 178 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 KLHDC1Q8N7A1 406 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 OR4S1Q8NGB4 309 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 OR13C2Q8NGS9 318 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 PHF21AQ96BD5 680 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 PRRC1Q96M27 445 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 ZNF570Q96NI8 536 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 SYT4Q9H2B2 425 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 TOR3AQ9H497 397 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 SIRT7Q9NRC8 400 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 C1orf123Q9NWV4 160 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 ONECUT1Q9UBC0 465 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 RPS6KA6Q9UK32 745 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 A4GNTQ9UNA3 340 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 POLR1DQ9Y2S0 133 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 LHFPL6Q9Y693 200 aa9.52□□□□□ -0.89
CLSTN3-209ENST00000539982 A0A1W2PRD5 423 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 A0A1W2PRF3 423 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 A0A1W2PRM7 423 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 H3BUX3 64 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 SLC22A2O15244 555 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 LHBP01229 141 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 LCATP04180 440 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 ZNF26P17031 533 aaPredicted RBP9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 BNIP1Q12981 228 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 ZBED5Q49AG3 693 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 FOXB2Q5VYV0 432 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 TEX36Q5VZQ5 186 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 NANOGP8Q6NSW7 305 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 PGM2L1Q6PCE3 622 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 NAA40Q86UY6 237 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 FGFRL1Q8N441 504 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 Q8N7P7 452 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 DTX3Q8N9I9 347 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 BEND2Q8NDZ0 799 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 TSPEARQ8WU66 669 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 NUAK2Q9H093 628 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 VSX1Q9NZR4 365 aaPredicted RBP9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 AURKCQ9UQB9 309 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 MAB21L2Q9Y586 359 aa9.51□□□□□ -0.89
CLSTN3-209ENST00000539982 MEIOCA2RUB1 952 aa9.5□□□□□ -0.89
CLSTN3-209ENST00000539982 CD300LBA8K4G0 201 aa9.5□□□□□ -0.89
CLSTN3-209ENST00000539982 F5H5K5 113 aa9.5□□□□□ -0.89
CLSTN3-209ENST00000539982 CDC42EP2O14613 210 aa9.5□□□□□ -0.89
CLSTN3-209ENST00000539982 IMPA2O14732 288 aa9.5□□□□□ -0.89
CLSTN3-209ENST00000539982 MPIG6BO95866 241 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms