RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 KRR1Q13601 381 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 GK2Q14410 553 aaPredicted RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 PDCD1Q15116 288 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 NDUFAF6Q330K2 333 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 DMRTA1Q5VZB9 504 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 PAQR6Q6TCH4 344 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 CBR4Q8N4T8 237 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 PLPP7Q8NBV4 271 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 GLYATL2Q8WU03 294 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 CTHRC1Q96CG8 243 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 FAM120BQ96EK7 910 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 ZNF385AQ96PM9 386 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 KATNB1Q9BVA0 655 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 OR51I1Q9H343 314 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 C1orf198Q9H425 327 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 NKIRAS2Q9NYR9 191 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 A0A096LPI6 279 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 A0A1W2PQD3 144 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 KRBOX1C9JBD0 128 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 AIM2O14862 343 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 CYTIPO60759 359 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 KDM4BO94953 1096 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 GIPRP48546 466 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 RPS26P62854 115 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 IL13RA1P78552 427 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 NAAAQ02083 359 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.61□□□□□ -1.35
GNE-205ENST00000539815 MICAQ29983 383 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 DEFB121Q5J5C9 76 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 ZNF678Q5SXM1 525 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 ANKRD16Q6P6B7 361 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 TMEM99Q8N816 258 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 OR8D4Q8NGM9 314 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 RNASE8Q8TDE3 154 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 STK35Q8TDR2 534 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 RPL3LQ92901 407 aaKnown RBP6.61□□□□□ -1.35
GNE-205ENST00000539815 MCUBQ9NWR8 336 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 P2RX2Q9UBL9 471 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 UBQLN2Q9UHD9 624 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 FZR1Q9UM11 496 aa6.61□□□□□ -1.35
GNE-205ENST00000539815 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 UTP20O75691 2785 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 A0A1W2PN81 502 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 A8MVM7 634 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 RFXANKO14593 260 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 SPI1P17947 270 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 MAPK3P27361 379 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 CHRNA7P36544 502 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 NME5P56597 212 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 MRPS11P82912 194 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 PGGHGQ32M88 737 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 RPL13AP3Q6NVV1 102 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LINC00299Q6ZSB3 139 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 OR2L13Q8N349 312 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 THRSPQ92748 146 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 OR7D2Q96RA2 312 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LRBAP50851 2863 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LYNX1G3V0Z9 82 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 MPC2O95563 127 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 H2AFB1P0C5Y9 115 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 JUNBP17275 347 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 GSTM3P21266 225 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 RAB1AP62820 205 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 BAK1Q16611 211 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 RNF212Q495C1 297 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 RANBP3LQ86VV4 465 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 MED12LQ86YW9 2145 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 CBLN2Q8IUK8 224 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 WDFY1Q8IWB7 410 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 FAM110DQ8TAY7 271 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 TWIST2Q8WVJ9 160 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LIPHQ8WWY8 451 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 C3orf30Q96M34 536 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 TRNT1Q96Q11 434 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 ZNF607Q96SK3 696 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 LMF2Q9BU23 707 aaKnown RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 MTHFD2LQ9H903 347 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 FAM118AQ9NWS6 357 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 TRAPPC4Q9Y296 219 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 CLDN16Q9Y5I7 305 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 COL27A1Q8IZC6 1860 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 E7ESA3 106 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 RNF13O43567 381 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 PVALBP20472 110 aaPredicted RBP6.6□□□□□ -1.35
GNE-205ENST00000539815 GATA3P23771 443 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 MYL9P24844 172 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 NUDT2P50583 147 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 SLC18A1P54219 525 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 DPY19L1Q2PZI1 675 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 KLHL22Q53GT1 634 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 WBP2NLQ6ICG8 309 aa6.6□□□□□ -1.35
GNE-205ENST00000539815 FAM71E1Q6IPT2 247 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms