RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ZNF85Q03923 595 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 UNQ6126/PRO20091Q6UXV3 157 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 FAM220AQ7Z4H9 259 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 SLC7A6Q92536 515 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 ALG8Q9BVK2 526 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 DUSP21Q9H596 190 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 ELOVL3Q9HB03 270 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 ERVK13-1Q9NX77 482 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 SLCO1C1Q9NYB5 712 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 PLEKHB1Q9UF11 243 aaPredicted RBP13.36□□□□□ -0.27
DDB1-216ENST00000539739 GRIP1Q9Y3R0 1128 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 METTL15A6NJ78 407 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 DEFB108AA8MXU0 73 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 M0R135 149 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 PSMD9O00233 223 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 ABHD16AO95870 558 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 CDK1P06493 297 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 DBHP09172 617 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 TACSTD2P09758 323 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 ZNF35P13682 527 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 SLC35A2P78381 396 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 SLC22A25Q6T423 547 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RFLNBQ8N5W9 214 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 ZNF283Q8N7M2 679 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 YIPF7Q8N8F6 280 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 ZNF799Q96GE5 643 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 LRP12Q9Y561 859 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 A6NNC1 897 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RGS10O43665 173 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 PAHP00439 452 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
DDB1-216ENST00000539739 CALCRP30988 508 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
DDB1-216ENST00000539739 DCTDP32321 178 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 SLC6A9P48067 706 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RGS6P49758 472 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 PRKXP51817 358 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 GABARAPL2P60520 117 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 CDK10Q15131 360 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 DRAM2Q6UX65 266 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 TMPRSS11AQ6ZMR5 421 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 C4orf45Q96LM5 186 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 HEATR1Q9H583 2144 aaKnown RBP13.35□□□□□ -0.27
DDB1-216ENST00000539739 MRM2Q9UI43 246 aaKnown RBP13.35□□□□□ -0.27
DDB1-216ENST00000539739 GNG8Q9UK08 70 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
DDB1-216ENST00000539739 PRR32B1ATL7 298 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 J3QLW9 94 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 SIAH2O43255 324 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 ATE1O95260 518 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 LIMS3P0CW19 117 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 LIMS4P0CW20 117 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 ZNF19P17023 458 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 RAD52P43351 418 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 CX3CR1P49238 355 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 RSPO1Q2MKA7 263 aaPredicted RBP13.34□□□□□ -0.27
DDB1-216ENST00000539739 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 ZNF684Q5T5D7 378 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 SHEQ5VZ18 495 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 SYS1Q8N2H4 156 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
DDB1-216ENST00000539739 CCDC90BQ9GZT6 254 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 PAK1IP1Q9NWT1 392 aaPredicted RBP13.34□□□□□ -0.27
DDB1-216ENST00000539739 CAB39Q9Y376 341 aaPredicted RBP13.34□□□□□ -0.27
DDB1-216ENST00000539739 CADP27708 2225 aa13.34□□□□□ -0.27
DDB1-216ENST00000539739 ATP6V1G2-DDX39BF2Z307 99 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 CCRL2O00421 344 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 MYL12BO14950 172 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 MAGEB4O15481 346 aaPredicted RBP13.33□□□□□ -0.28
DDB1-216ENST00000539739 MRPS14O60783 128 aaKnown RBP13.33□□□□□ -0.28
DDB1-216ENST00000539739 COL8A1P27658 744 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 UCP2P55851 309 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 OR12D2P58182 307 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 MVKQ03426 396 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 SPOCK1Q08629 439 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 CD300CQ08708 224 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 TP53I3Q53FA7 332 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 RNLSQ5VYX0 342 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 PRSS48Q7RTY5 328 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 C1orf174Q8IYL3 243 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 C4orf36Q96KX1 117 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 ZNF649Q9BS31 505 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 DCUN1D5Q9BTE7 237 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 BCL2L14Q9BZR8 327 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 ERVK-18Q9QC07 812 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 ATP23Q9Y6H3 246 aa13.33□□□□□ -0.28
DDB1-216ENST00000539739 TMEM269A0A1B0GVZ9 245 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 J3QW42 95 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 RPP14O95059 124 aaKnown RBP13.32□□□□□ -0.28
DDB1-216ENST00000539739 MT-ND5P03915 603 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 LCATP04180 440 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms