RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 PQLC3Q8N755 202 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 C11orf72Q8NBR9 251 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 RTN4IP1Q8WWV3 396 aaPredicted RBP3.78□□□□□ -1.8
TRAV11-201ENST00000539512 ESR2Q92731 530 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 ANP32EQ9BTT0 268 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 SLIRPQ9GZT3 109 aaKnown RBP3.78□□□□□ -1.8
TRAV11-201ENST00000539512 FGF23Q9GZV9 251 aaPredicted RBP3.78□□□□□ -1.8
TRAV11-201ENST00000539512 ZC4H2Q9NQZ6 224 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 TSSC4Q9Y5U2 329 aaPredicted RBP3.78□□□□□ -1.8
TRAV11-201ENST00000539512 KIF13AQ9H1H9 1805 aa3.78□□□□□ -1.8
TRAV11-201ENST00000539512 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 H0YJW9 148 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 GABRPO00591 440 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 SOCS1O15524 211 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 FCN3O75636 299 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 PAHP00439 452 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 KRT16P08779 473 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 UBCP0CG48 685 aaKnown RBP3.77□□□□□ -1.81
TRAV11-201ENST00000539512 ME2P23368 584 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 CCNG1P51959 295 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 CYP24A1Q07973 514 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 ILKQ13418 452 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 CBLN2Q8IUK8 224 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 GPR26Q8NDV2 337 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 TTLQ8NG68 377 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 OR1J4Q8NGS1 313 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 OR6N1Q8NGY5 312 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 SLC25A46Q96AG3 418 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 RMI2Q96E14 147 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 RNF145Q96MT1 663 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 ING2Q9H160 280 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 MRPS30Q9NP92 439 aaKnown RBP3.77□□□□□ -1.81
TRAV11-201ENST00000539512 EXOSC4Q9NPD3 245 aaKnown RBP3.77□□□□□ -1.81
TRAV11-201ENST00000539512 MCUBQ9NWR8 336 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 RHBDL2Q9NX52 303 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 TBC1D24Q9ULP9 559 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 RCL1Q9Y2P8 373 aaKnown RBP3.77□□□□□ -1.81
TRAV11-201ENST00000539512 SNAPC4Q5SXM2 1469 aa3.77□□□□□ -1.81
TRAV11-201ENST00000539512 ZCCHC6Q5VYS8 1495 aaKnown RBP3.76□□□□□ -1.81
TRAV11-201ENST00000539512 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 A0A1W2PRD5 423 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 GOLGA8TH3BQL2 631 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 HLA-DQB1P01920 261 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 HTR1DP28221 377 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 PFN2P35080 140 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 UBE2MP61081 183 aaKnown RBP3.76□□□□□ -1.81
TRAV11-201ENST00000539512 KATNAL2Q8IYT4 538 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 OR52P1PQ8NH57 321 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 ZNF721Q8TF20 911 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 GPR21Q99679 349 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 RBBP8Q99708 897 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 RGS18Q9NS28 235 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 SLC17A7Q9P2U7 560 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 HES2Q9Y543 173 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 SYNJ1O43426 1573 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 INSRP06213 1382 aa3.76□□□□□ -1.81
TRAV11-201ENST00000539512 C5orf63A6NC05 138 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 SUPT3HB4E1H0 165 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 KRBOX1C9JBD0 128 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 NME4O00746 187 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 IGLV3-19P01714 112 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 IGHV3-11P01762 117 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 CD74P04233 296 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 GLAP06280 429 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 FGF4P08620 206 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 CTRB1P17538 263 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 USF1P22415 310 aaPredicted RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 KIR3DL2P43630 455 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 RAD51Q06609 339 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 TFDP2Q14188 446 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 ZNF829Q3KNS6 432 aaPredicted RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 YIF1BQ5BJH7 314 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 RWDD4Q6NW29 188 aaKnown RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 H3F3CQ6NXT2 135 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 RTL4Q6ZR62 310 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 MDP1Q86V88 176 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 LYPD1Q8N2G4 141 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 OR52E5Q8NH55 327 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 RAB1CQ92928 201 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 RERGQ96A58 199 aaPredicted RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 TIMM29Q9BSF4 260 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 SCRT1Q9BWW7 348 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 GGTLC1Q9BX51 225 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 PXMP2Q9NR77 195 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 CAB39Q9Y376 341 aaPredicted RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 PIKFYVEQ9Y2I7 2098 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 PCF11O94913 1555 aaKnown RBP3.75□□□□□ -1.81
TRAV11-201ENST00000539512 CAMTA1Q9Y6Y1 1673 aa3.75□□□□□ -1.81
TRAV11-201ENST00000539512 PTPRMP28827 1452 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 IGHV3OR16-9A0A0B4J2B5 98 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 TMEM120BA0PK00 339 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 BCKDKO14874 412 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 XRCC2O43543 280 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 ZNF14P17017 642 aaPredicted RBP3.74□□□□□ -1.81
TRAV11-201ENST00000539512 TCP1P17987 556 aaKnown RBP3.74□□□□□ -1.81
TRAV11-201ENST00000539512 RAB5AP20339 215 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 GFERP55789 205 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 ITIH4Q14624 930 aa3.74□□□□□ -1.81
TRAV11-201ENST00000539512 FHOD3Q2V2M9 1422 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms