RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 DCLRE1BQ9H816 532 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 TUBG2Q9NRH3 451 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 GPR160Q9UJ42 338 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 FBXO9Q9UK97 447 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-206ENST00000539417 PLSCR5A0PG75 271 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 IQCF6A8MYZ5 107 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 RP2O75695 350 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 PNPP00491 289 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 PDLIM4P50479 330 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-206ENST00000539417 OCLNQ16625 522 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 SLC25A30Q5SVS4 291 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
RPAIN-206ENST00000539417 PPP1R3EQ9H7J1 279 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 AMBNQ9NP70 447 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 DCAF16Q9NXF7 216 aa13.37□□□□□ -0.27
RPAIN-206ENST00000539417 MRM2Q9UI43 246 aaKnown RBP13.37□□□□□ -0.27
RPAIN-206ENST00000539417 IGHV3-64DA0A0J9YX35 117 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 HLA-DPB1P04440 258 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 INHBBP09529 407 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ADARB1P78563 741 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ROM1Q03395 351 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF85Q03923 595 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SLC34A1Q06495 639 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 KRTAP1-1Q07627 177 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 MALLQ13021 153 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 RIN1Q13671 783 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SMN1Q16637 294 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 MOGQ16653 247 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF322Q6U7Q0 402 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 MRPL21Q7Z2W9 205 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 PACRGLQ8N7B6 248 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 OR10AD1Q8NGE0 317 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 OR8B12Q8NGG6 310 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 DVL3Q92997 716 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 LYZL4Q96KX0 146 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 BPESC1Q9GZL8 116 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 FAM206AQ9NX38 181 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 NKIRAS2Q9NYR9 191 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 IGHV4-61A0A0C4DH41 118 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 CD300LBA8K4G0 201 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 J3QRE1 110 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 WNT9BO14905 357 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 TPD52L2O43399 206 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SRSF10O75494 262 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ADH4P08319 380 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SELEP16581 610 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 NR4A2P43354 598 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 MTNR1AP48039 350 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 DSCR9P59020 149 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 PSMA6P60900 246 aaKnown RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 FAM3AP98173 230 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 GFOD2Q3B7J2 385 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 Q71RC1 249 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 OR10H4Q8NGA5 316 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 RDH5Q92781 318 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ELMOD3Q96FG2 381 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 RDH12Q96NR8 316 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 RNPEPL1Q9HAU8 725 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF275Q9NSD4 429 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-206ENST00000539417 IKZF2Q9UKS7 526 aa13.36□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF670-ZNF695F2Z2N8 137 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 MT-ND5P03915 603 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 CD55P08174 381 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 GNAO1P09471 354 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 LIPAP38571 399 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 TNFAIP6P98066 277 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-206ENST00000539417 PCGF3Q3KNV8 242 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF691Q5VV52 312 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 OR56B2PQ8NGI1 322 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 CNIH3Q8TBE1 160 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 ITLN1Q8WWA0 313 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 RFKQ969G6 155 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 RNF166Q96A37 237 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-206ENST00000539417 LGALS12Q96DT0 336 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 REEP6Q96HR9 211 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 SAP30LQ9HAJ7 183 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 DECR2Q9NUI1 292 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 ZDHHC8Q9ULC8 765 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms