RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 DCAF16Q9NXF7 216 aa9.74□□□□□ -0.85
RTN3-209ENST00000538995 UBAP1Q9NZ09 502 aa9.74□□□□□ -0.85
RTN3-209ENST00000538995 POLR3KQ9Y2Y1 108 aaPredicted RBP9.74□□□□□ -0.85
RTN3-209ENST00000538995 ANK2Q01484 3957 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 A0A0A6YYJ9 748 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 CD300LBA8K4G0 201 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 A8MXK9 166 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 F5H0A9 414 aaPredicted RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 PRODHO43272 600 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 XRCC2O43543 280 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 TCF21O43680 179 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 GLCEO94923 617 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 APOC1P02654 83 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 SBK2P0C263 348 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 CLUP10909 449 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 GSTT1P30711 240 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 CD200P41217 278 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 GINS1Q14691 196 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 ZMYND11Q15326 602 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 TAF13Q15543 124 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 SNAI3Q3KNW1 292 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 DCAF12L2Q5VW00 463 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 SHFQ7M4L6 423 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 C1QL2Q7Z5L3 287 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 NAA40Q86UY6 237 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 C1orf87Q8N0U7 546 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 Q8TCH9 128 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 RNF133Q8WVZ7 376 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 SLCO4A1Q96BD0 722 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 CADM1Q9BY67 442 aaKnown RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 TMPRSS13Q9BYE2 586 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 MMADHCQ9H3L0 296 aaPredicted RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 METTL17Q9H7H0 456 aaPredicted RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 SP140LQ9H930 580 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 PATZ1Q9HBE1 687 aaKnown RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 SLC25A19Q9HC21 320 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 MRPL15Q9P015 296 aaKnown RBP9.73□□□□□ -0.85
RTN3-209ENST00000538995 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
RTN3-209ENST00000538995 FAM183AA6NL82 134 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 PRR23D1E9PI22 279 aaPredicted RBP9.72□□□□□ -0.85
RTN3-209ENST00000538995 F5H5P2 479 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 H0YL77 283 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 GSC2O15499 205 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 GMDSO60547 372 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 ATP5HO75947 161 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 PTBP3O95758 552 aaKnown RBP9.72□□□□□ -0.85
RTN3-209ENST00000538995 PRR23D2P0DMB1 279 aaPredicted RBP9.72□□□□□ -0.85
RTN3-209ENST00000538995 POU1F1P28069 291 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 PRKXP51817 358 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 RAD23AP54725 363 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 CDK5Q00535 292 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 ZNF92Q03936 586 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 EIF2B1Q14232 305 aaKnown RBP9.72□□□□□ -0.85
RTN3-209ENST00000538995 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 SLC35D3Q5M8T2 416 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 DPY19L4Q7Z388 723 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 ERI1Q8IV48 349 aaKnown RBP9.72□□□□□ -0.85
RTN3-209ENST00000538995 TIGD4Q8IY51 512 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 HS3ST5Q8IZT8 346 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 PARP8Q8N3A8 854 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 SPERTQ8NA61 448 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 OR6N2Q8NGY6 317 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 SPSB4Q96A44 273 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 MED20Q9H944 212 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 CENPMQ9NSP4 180 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 LRCH1Q9Y2L9 728 aa9.72□□□□□ -0.85
RTN3-209ENST00000538995 GGT3PA6NGU5 568 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 CEACAM18A8MTB9 384 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 HLA-DPB1P04440 258 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 IRF2P14316 349 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 CFL1P23528 166 aaKnown RBP9.71□□□□□ -0.86
RTN3-209ENST00000538995 HSD11B1P28845 292 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 DDOSTP39656 456 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OPRL1P41146 370 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 CX3CR1P49238 355 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 LCN2P80188 198 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 MZT1Q08AG7 82 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 MAB21L1Q13394 359 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OR8G1Q15617 311 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 ESCO2Q56NI9 601 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 PLBD1Q6P4A8 553 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 FAHD1Q6P587 224 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
RTN3-209ENST00000538995 USP43Q70EL4 1123 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 MOGAT3Q86VF5 341 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OR52H1Q8NGJ2 320 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OR11L1Q8NGX0 322 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OR2AE1Q8NHA4 323 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 OTOSQ8NHW6 89 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 UTP4Q969X6 686 aaKnown RBP9.71□□□□□ -0.86
RTN3-209ENST00000538995 OTULINQ96BN8 352 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 PLEKHA8Q96JA3 519 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 ADAT1Q9BUB4 502 aaKnown RBP9.71□□□□□ -0.86
RTN3-209ENST00000538995 ABHD6Q9BV23 337 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 PRRG3Q9BZD7 231 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms