RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 MRPL21Q7Z2W9 205 aaKnown RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 SPRYD4Q8WW59 207 aaPredicted RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 MCUR1Q96AQ8 359 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 ZNF799Q96GE5 643 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 ADAT1Q9BUB4 502 aaKnown RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 MED4Q9NPJ6 270 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 CTSZQ9UBR2 303 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 TMCC3Q9ULS5 477 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 CD300LBA8K4G0 201 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 ARPC2O15144 300 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 ENSAO43768 121 aaKnown RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 PSKH1P11801 424 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 HSD17B1P14061 328 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 MDKP21741 143 aaPredicted RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 OTX1P32242 354 aaPredicted RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 RPS27P42677 84 aaKnown RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 NPY4RP50391 375 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 ZNF92Q03936 586 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 OR8G1Q15617 311 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 SLC35F1Q5T1Q4 408 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 C16orf87Q6PH81 154 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 SPATC1Q76KD6 591 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 OR2AE1Q8NHA4 323 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 GNPDA2Q8TDQ7 276 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 TMIGD2Q96BF3 282 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 NSMCE2Q96MF7 247 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 TECTBQ96PL2 329 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 DDOQ99489 341 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 ELAC2Q9BQ52 826 aaKnown RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 SLC22A4Q9H015 551 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 NSRP1Q9H0G5 558 aaKnown RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 SLITRK2Q9H156 845 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 MMADHCQ9H3L0 296 aaPredicted RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 EGLN3Q9H6Z9 239 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 FN3KRPQ9HA64 309 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 NOP16Q9Y3C1 178 aaKnown RBP10.4□□□□□ -0.74
VAMP1-206ENST00000538970 CDH10Q9Y6N8 788 aa10.4□□□□□ -0.74
VAMP1-206ENST00000538970 C5orf63A6NC05 138 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 TVP23AA6NH52 213 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 SRRM5B3KS81 715 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 LGALS8O00214 317 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 BHLHE40O14503 412 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 GMDSO60547 372 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 SFTPBP07988 381 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 ZNF823P16415 610 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 OMGP23515 440 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 PYCR1P32322 319 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 CFHR2P36980 270 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 BPIFB3P59826 476 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 GLYATL3Q5SZD4 288 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 GPR157Q5UAW9 335 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 RUSC1-AS1Q66K80 236 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 LYPD4Q6UWN0 246 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 DRAM2Q6UX65 266 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 CYB561A3Q8NBI2 242 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 PROKR2Q8NFJ6 384 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 OR52L1Q8NGH7 329 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 ZNRF4Q8WWF5 429 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 PCGF1Q9BSM1 259 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 IL1RAPQ9NPH3 570 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 MRPL15Q9P015 296 aaKnown RBP10.39□□□□□ -0.75
VAMP1-206ENST00000538970 CD300AQ9UGN4 299 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 MMP24Q9Y5R2 645 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
VAMP1-206ENST00000538970 VWFP04275 2813 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 GGT3PA6NGU5 568 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 ZNF879B4DU55 563 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 P2RY10O00398 339 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 MMP9P14780 707 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 MSX2P35548 267 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 ZNF362Q5T0B9 420 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 CD276Q5ZPR3 534 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 SFRP4Q6FHJ7 346 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 RPL13AP3Q6NVV1 102 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 Q6YL49 198 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 ZDHHC21Q8IVQ6 265 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 PGAM4Q8N0Y7 254 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 BOLLQ8N9W6 283 aaKnown RBP10.38□□□□□ -0.75
VAMP1-206ENST00000538970 PLPP7Q8NBV4 271 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 OR9Q2Q8NGE9 314 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 OR8D4Q8NGM9 314 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 OR2T4Q8NH00 348 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 TBX15Q96SF7 602 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 BTBD10Q9BSF8 475 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 MARCH7Q9H992 704 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 SMURF1Q9HCE7 757 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 NOX4Q9NPH5 578 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 TRIM36Q9NQ86 728 aa10.38□□□□□ -0.75
VAMP1-206ENST00000538970 ERVK-18Q9QC07 812 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms