RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
CLSTN3-208ENST00000538933 ERVK-18Q9QC07 812 aa10.71□□□□□ -0.69
CLSTN3-208ENST00000538933 PCDHB10Q9UN67 800 aa10.71□□□□□ -0.69
CLSTN3-208ENST00000538933 AMDHD2Q9Y303 409 aa10.71□□□□□ -0.69
CLSTN3-208ENST00000538933 TIMM10BQ9Y5J6 103 aa10.71□□□□□ -0.69
CLSTN3-208ENST00000538933 A0A087WXM4 84 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 IQCMA0A1B0GVH7 501 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 TRIM77I1YAP6 450 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 M0R1B8 84 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SGCEO43556 437 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 DOK2O60496 412 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 KRT8P05787 483 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF32P17041 273 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 HSD11B1P28845 292 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ACTA2P62736 377 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ACTG2P63267 376 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 TUBA1BP68363 451 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 TUBA4AP68366 448 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ENDOGQ14249 297 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 GABRA6Q16445 453 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 GSG1Q2KHT4 349 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF322Q6U7Q0 402 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 TMPRSS11AQ6ZMR5 421 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 TUBA1AQ71U36 451 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SPATC1Q76KD6 591 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 LHFPL3Q86UP9 236 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 WDR31Q8NA23 367 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ASB17Q8WXJ9 295 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SLAMF6Q96DU3 332 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 ALG8Q9BVK2 526 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 MROQ9BYG7 248 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 DUSP21Q9H596 190 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SLC17A5Q9NRA2 495 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 FKBP14Q9NWM8 211 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 PLEK2Q9NYT0 353 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 CYB5R1Q9UHQ9 305 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 LHFPL6Q9Y693 200 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
CLSTN3-208ENST00000538933 A0A1W2PQL4 384 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF878C9JN71 531 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 RER1O15258 196 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 PTHP01270 115 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 IGHA1P01876 353 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 HLA-HP01893 362 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 MT-ND2P03891 347 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 H2BFMP0C1H6 154 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ATP6V1B1P15313 513 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ALOX5APP20292 161 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 C21orf33P30042 268 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 RAB1AP62820 205 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF773Q6PK81 442 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 PLEKHG7Q6ZR37 379 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 YIPF7Q8N8F6 280 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 TSPAN14Q8NG11 270 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ABHD6Q9BV23 337 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 MND1Q9BWT6 205 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 PAK1IP1Q9NWT1 392 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ERVK13-1Q9NX77 482 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 GNG8Q9UK08 70 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 FBXL3Q9UKT7 428 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 COPS3Q9UNS2 423 aa10.69□□□□□ -0.7
CLSTN3-208ENST00000538933 ARPC4-TTLL3A0A0A6YYG9 625 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ATP6V1G2-DDX39BF2Z307 99 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 J3QLW9 94 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 PSMD9O00233 223 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF19P17023 458 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 PAX7P23759 505 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 APLNRP35414 380 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 HTR5AP47898 357 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 RIDAP52758 137 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF85Q03923 595 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 EGR3Q06889 387 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 RIN1Q13671 783 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 GALEQ14376 348 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 MED22Q15528 200 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 PABPC1L2AQ5JQF8 200 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ELFN2Q5R3F8 820 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 C1orf229Q6ZS94 237 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 MDP1Q86V88 176 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 AKR7LQ8NHP1 331 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 SGCDQ92629 289 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ATF6BQ99941 703 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 VRK1Q99986 396 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 OR2H1Q9GZK4 316 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 HDHD2Q9H0R4 259 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 MOV10Q9HCE1 1003 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 KLHDC2Q9Y2U9 406 aa10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 CAB39Q9Y376 341 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-208ENST00000538933 WNK2Q9Y3S1 2297 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms