RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 MRPL21Q7Z2W9 205 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 NAA40Q86UY6 237 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 LINC00346Q8IVM7 164 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 RNF113BQ8IZP6 322 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 FGFRL1Q8N441 504 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 FAM46AQ96IP4 442 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 C1orf123Q9NWV4 160 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 DNAJB11Q9UBS4 358 aa11.54□□□□□ -0.56
SMARCA4-206ENST00000538456 IGHV3OR15-7A0A075B7D8 119 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A0A0G2JND7 137 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A6NLC8 198 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 FAM220BPB1ANY3 271 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 DCTN6O00399 190 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 MRASO14807 208 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 NDUFB2O95178 105 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 ZNF682O95780 498 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 FBP1P09467 338 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 GPR139Q6DWJ6 353 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 ZNF826PQ6ZT77 177 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 TMPRSS11FQ6ZWK6 438 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 ADCK1Q86TW2 530 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 FAM90A1Q86YD7 464 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 STON2Q8WXE9 905 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 PITX2Q99697 317 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 NRIP3Q9NQ35 241 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 TRIM36Q9NQ86 728 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 ZNRD1Q9P1U0 126 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 IER3IP1Q9Y5U9 82 aa11.53□□□□□ -0.56
SMARCA4-206ENST00000538456 A0A1B0GW55 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 hCG_1807616A0A1W2PRN6 198 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 ANKRD61A6NGH8 418 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 TSPAN9O75954 239 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 OPN1MWP04001 364 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 GRPP07492 148 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 CDKN2AP42771 156 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DLX1P56177 255 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 TRAP1Q12931 704 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 KRTAP27-1Q3LI81 207 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 KPRPQ5T749 579 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 PGM2L1Q6PCE3 622 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4L9Q6RFH8 374 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 Q6ZTK2 550 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 LNX2Q8N448 690 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 ATF6BQ99941 703 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 PPA2Q9H2U2 334 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 TOR3AQ9H497 397 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 CNTD2Q9H8S5 307 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 DUX4Q9UBX2 424 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 SIGLEC7Q9Y286 467 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 SIGLEC9Q9Y336 463 aa11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 CAB39Q9Y376 341 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-206ENST00000538456 IGLV1-36A0A0B4J1U3 117 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 A0A1B0GVI7 797 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 CD300LBA8K4G0 201 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 NDUFA2O43678 99 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 ECDO95905 644 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 CRABP1P29762 137 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 GABRA5P31644 462 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 GGT2P36268 569 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 TGFBR2P37173 567 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 ELF3P78545 371 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 GCSAMQ8N6F7 178 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC26A10Q8NG04 563 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 OR2AE1Q8NHA4 323 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 MRAPQ8TCY5 172 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC22A4Q9H015 551 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 GMPR2Q9P2T1 348 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 TMEM5Q9Y2B1 443 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 NOP16Q9Y3C1 178 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 KPTNQ9Y664 436 aa11.51□□□□□ -0.57
SMARCA4-206ENST00000538456 GGT3PA6NGU5 568 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms