RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SGK3Q96BR1 496 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 FGF23Q9GZV9 251 aaPredicted RBP11.14□□□□□ -0.63
CHFR-216ENST00000538235 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 ACOXLQ9NUZ1 547 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 EIF3KQ9UBQ5 218 aaKnown RBP11.14□□□□□ -0.63
CHFR-216ENST00000538235 SPEF1Q9Y4P9 236 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 N6AMT1Q9Y5N5 214 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 ANK3Q12955 4377 aaKnown RBP11.14□□□□□ -0.63
CHFR-216ENST00000538235 XPNPEP2O43895 674 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 TMCC2O75069 709 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 LIMS3P0CW19 117 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 LIMS4P0CW20 117 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 ACKR3P25106 362 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 PSMB10P40306 273 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 RGS6P49758 472 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 TMED1Q13445 227 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 ZNF718Q3SXZ3 478 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 MEDAGQ5VYS4 303 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 KRT77Q7Z794 578 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 ZNF679Q8IYX0 411 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 BHLHE23Q8NDY6 225 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 SPTSSAQ969W0 71 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 HAVCR1Q96D42 359 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 VRK1Q99986 396 aaPredicted RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 DYNLRB1Q9NP97 96 aa11.13□□□□□ -0.63
CHFR-216ENST00000538235 MRPS18AQ9NVS2 196 aaKnown RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 PAK1IP1Q9NWT1 392 aaPredicted RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 H2AFY2Q9P0M6 372 aaPredicted RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
CHFR-216ENST00000538235 IGHV4-30-2A0A087WSY4 118 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 C17orf100A8MU93 164 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 E9PI62 339 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 ZNF670-ZNF695F2Z2N8 137 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 H3BSA7 217 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 J3QW42 95 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 TBX1O43435 398 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 SSX4O60224 188 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 TTRP02766 147 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 ANXA2P07355 339 aaKnown RBP11.12□□□□□ -0.63
CHFR-216ENST00000538235 RAC2P15153 192 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 HSD11B1P28845 292 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 OR12D2P58182 307 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 NANOS3P60323 173 aaKnown RBP11.12□□□□□ -0.63
CHFR-216ENST00000538235 FAM3AP98173 230 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 TAF13Q15543 124 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 CDONQ4KMG0 1287 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 TTC23Q5W5X9 447 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 XAF1Q6GPH4 301 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 RHOUQ7L0Q8 258 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 PRSS35Q8N3Z0 413 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 OR10AD1Q8NGE0 317 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 RORBQ92753 470 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 Q96MF0 132 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
CHFR-216ENST00000538235 DLL4Q9NR61 685 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 IKZF2Q9UKS7 526 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHFR-216ENST00000538235 SLC22A13Q9Y226 551 aa11.12□□□□□ -0.63
CHFR-216ENST00000538235 IGHV3-64DA0A0J9YX35 117 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 A0A1B0GTI1 187 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 C3orf80F5H4A9 247 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 H0YJX3 145 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 SPRY3O43610 288 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 TIMM8AO60220 97 aaPredicted RBP11.11□□□□□ -0.63
CHFR-216ENST00000538235 LMX1BO60663 402 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 FAM20BO75063 409 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 RP2O75695 350 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 LALBAP00709 142 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 HLA-DPB1P04440 258 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 OR2T7P0C7T2 308 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 GCH1P30793 250 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 ETV1P50549 477 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 EFNA4P52798 201 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 CCL8P80075 99 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 POU4F2Q12837 409 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 IL18R1Q13478 541 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 TSTQ16762 297 aaKnown RBP11.11□□□□□ -0.63
CHFR-216ENST00000538235 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 LIPNQ5VXI9 398 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 SPNS3Q6ZMD2 512 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 LHFPL3Q86UP9 236 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 OR2T27Q8NH04 317 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 GGHQ92820 318 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 RFKQ969G6 155 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 SIGLEC11Q96RL6 698 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 FGF20Q9NP95 211 aaPredicted RBP11.11□□□□□ -0.63
CHFR-216ENST00000538235 FKBP14Q9NWM8 211 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 ERVK13-1Q9NX77 482 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 CLEC2DQ9UHP7 191 aa11.11□□□□□ -0.63
CHFR-216ENST00000538235 CD300LBA8K4G0 201 aa11.1□□□□□ -0.63
CHFR-216ENST00000538235 VWC2LB2RUY7 222 aa11.1□□□□□ -0.63
CHFR-216ENST00000538235 H3BSH0 61 aa11.1□□□□□ -0.63
CHFR-216ENST00000538235 WNT9BO14905 357 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms