RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DRAM2Q6UX65 266 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 Q6ZSR3 168 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 Q6ZTK2 550 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 HIST2H3AQ71DI3 136 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 UTS2BQ765I0 119 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CHMP1BQ7LBR1 199 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 NAXDQ8IW45 347 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 WDFY1Q8IWB7 410 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 C20orf196Q8IYI0 205 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 GPR137CQ8N3F9 429 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 TMEM105Q8N8V8 129 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ZDHHC22Q8N966 263 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 SPERTQ8NA61 448 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR56B1Q8NGI3 324 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR4D6Q8NGJ1 314 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR52H1Q8NGJ2 320 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR51A2Q8NGJ7 313 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR13C9Q8NGT0 318 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR2T35Q8NGX2 323 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR14L1PQ8NHC6 308 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 AQP3Q92482 292 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 RELTQ969Z4 430 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PPP1R14AQ96A00 147 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CPNE4Q96A23 557 aaPredicted RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 SEH1LQ96EE3 360 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ADAT3Q96EY9 351 aaPredicted RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 SFXN2Q96NB2 322 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 GNRHR2Q96P88 292 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ZNF416Q9BWM5 594 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 B3GNT4Q9C0J1 378 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CST11Q9H112 138 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ARRDC1-AS1Q9H2J1 176 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PNRC2Q9NPJ4 139 aaKnown RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 GPR84Q9NQS5 396 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 FOXD3Q9UJU5 478 aaPredicted RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 MRPS28Q9Y2Q9 187 aaKnown RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 RHBDD3Q9Y3P4 386 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PCDHGA1Q9Y5H4 931 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 WDR87Q6ZQQ6 2873 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 SDK1Q7Z5N4 2213 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 TECTAO75443 2155 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 A0A0J9YW62 118 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TMEM82A0PJX8 343 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TUBAL3A6NHL2 446 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR6C65A6NJZ3 312 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 F5H5P2 479 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 H3BUI4 141 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PYCARD-AS1I3L0S3 204 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 M0R135 149 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 M0R233 179 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TNFSF11O14788 317 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 SMAD9O15198 467 aaKnown RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 GDF9O60383 454 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 DHRS3O75911 302 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR2A4O95047 310 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 WDPCPO95876 746 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 IGLV3-1P01715 115 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 HPXP02790 462 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OPN1LWP04000 364 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CD3DP04234 171 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 AMY2AP04746 511 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ITGB2P05107 769 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 HCKP08631 526 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CST2P09228 141 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 VSIG8P0DPA2 414 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PRF1P14222 555 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ANXA7P20073 488 aaKnown RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 CNR1P21554 472 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OTX1P32242 354 aaPredicted RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 CDAP32320 146 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 RAD52P43351 418 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ALDH3B1P43353 468 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CARD18P57730 90 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 B3GALT5-AS1P59052 145 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TAS2R31P59538 309 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 GNG2P59768 71 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ZP1P60852 638 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 UBE2MP61081 183 aaKnown RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 QRFPP83859 136 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FGL1Q08830 312 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PLA2G7Q13093 441 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 IKZF1Q13422 519 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ENDOGQ14249 297 aaKnown RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 PPA1Q15181 289 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ZNF260Q3ZCT1 412 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 NRN1LQ496H8 165 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PLA2G2CQ5R387 149 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CLVS2Q5SYC1 327 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ZBTB37Q5TC79 503 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ABHD17BQ5VST6 288 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FAM27BQ5VT28 67 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CDCP2Q5VXM1 449 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 LAMTOR1Q6IAA8 161 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FAHD2BQ6P2I3 314 aaPredicted RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 FAM57BQ71RH2 274 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 SLC36A1Q7Z2H8 476 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms