RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 AP1ARQ63HQ0 302 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RTL6Q6ICC9 239 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 Q6ZT83 130 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TMPRSS11FQ6ZWK6 438 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RELL2Q8NC24 303 aaPredicted RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 ASB10Q8WXI3 467 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RNASE6Q93091 150 aaKnown RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 MUL1Q969V5 352 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 SCMH1Q96GD3 660 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 PTDSS2Q9BVG9 487 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 BEX2Q9BXY8 128 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 BEX1Q9HBH7 125 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 EXOSC3Q9NQT5 275 aaKnown RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 TMEM38BQ9NVV0 291 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 REV1Q9UBZ9 1251 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TNCP24821 2201 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 CENPBD1B2RD01 187 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ADAM20O43506 726 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PAHP00439 452 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 SLC2A2P11168 524 aaPredicted RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 PGAM2P15259 253 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 OMGP23515 440 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CD40P25942 277 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 FKBP2P26885 142 aaKnown RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 S100A5P33763 92 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ARR3P36575 388 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 HES1Q14469 280 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TAF9Q16594 264 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CLEC2AQ6UVW9 174 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TFAP2EQ6VUC0 442 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 OR6X1Q8NH79 312 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TIMD4Q96H15 378 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 COPS3Q9UNS2 423 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 FKBP7Q9Y680 259 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 A0A0B4J203 849 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 H0YAE9 185 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TERTO14746 1132 aaKnown RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 MPZL2O60487 215 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CYTIPO60759 359 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ZNF35P13682 527 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CD53P19397 219 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 THBS4P35443 961 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 GLP1RP43220 463 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ADORA2A-AS1P86434 159 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PLAURQ03405 335 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 SPIN3Q5JUX0 258 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 IGFL3Q6UXB1 125 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PAMR1Q6UXH9 720 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 LGALS12Q96DT0 336 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 SLX1AQ9BQ83 275 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ADAT1Q9BUB4 502 aaKnown RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 RNF167Q9H6Y7 350 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 SP140LQ9H930 580 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 HHLA2Q9UM44 414 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 LRP12Q9Y561 859 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 A3GALT2U3KPV4 340 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PLXNB3Q9ULL4 1909 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 LOC107986453A0A1B0GWG9 222 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 E9PI62 339 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PAX6P26367 422 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 BMXP51813 675 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 P2RY6Q15077 328 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 HSD17B12Q53GQ0 312 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ZNF684Q5T5D7 378 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 H3F3CQ6NXT2 135 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 GLCCI1Q86VQ1 547 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 MKXQ8IYA7 352 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ST7LQ8TDW4 575 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 GGHQ92820 318 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TMIGD2Q96BF3 282 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 NRIP3Q9NQ35 241 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 TMEM100Q9NV29 134 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 C1orf123Q9NWV4 160 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ONECUT1Q9UBC0 465 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 NUP50Q9UKX7 468 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CACNG2Q9Y698 323 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 HAX1O00165 279 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CYB5R3P00387 301 aaPredicted RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 ZNF17P17021 662 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 MAP2K3P46734 347 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 RAB25P57735 213 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 RIPK1Q13546 671 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ACSM3Q53FZ2 586 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 SSX6Q7RTT6 188 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 PAQR4Q8N4S7 273 aaPredicted RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ITLN1Q8WWA0 313 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 OR51E2Q9H255 320 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 RNF122Q9H9V4 155 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 IL20Q9NYY1 176 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 NUFIP1Q9UHK0 495 aaKnown RBP6.3□□□□□ -1.4
MSH6-209ENST00000538136 KLHDC2Q9Y2U9 406 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 ZNF175Q9Y473 711 aa6.3□□□□□ -1.4
MSH6-209ENST00000538136 MAGEA13PA6NCF6 341 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms