RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OR2M5A3KFT3 312 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 KIR3DP1A8MWS1 328 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 PYCARD-AS1I3L0S3 204 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 SIGLEC5O15389 551 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 PRAF2O60831 178 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF432O94892 652 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 HPP00738 406 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 PGA4P0DJD7 388 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 PGA3P0DJD8 388 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ICAM2P13598 275 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 FKBP2P26885 142 aaKnown RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 NUP62P37198 522 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 GSK3AP49840 483 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 DSCR4P56555 118 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 H2BFSP57053 126 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 HLXQ14774 488 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM69Q5SWH9 247 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ASPHD2Q6ICH7 369 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 KCTD18Q6PI47 426 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 BAIAP2L2Q6UXY1 529 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 TMPPEQ6ZT21 453 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 HDDC2Q7Z4H3 204 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 DCXRQ7Z4W1 244 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 CATSPERDQ86XM0 798 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 OR1J4Q8NGS1 313 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 C11orf40Q8WZ69 217 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 OXGR1Q96P68 337 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 COMMD4Q9H0A8 199 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF275Q9NSD4 429 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-210ENST00000538120 MBD2Q9UBB5 411 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 FBXL3Q9UKT7 428 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 LOC102725191A0A1B0GVB3 256 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 AQP7P3A6NL99 342 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
CLIP1-210ENST00000538120 BET1O15155 118 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 AQP8O94778 261 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 MT-CO3P00414 261 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 GIPP09681 153 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF806P0C7X5 589 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF823P16415 610 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-210ENST00000538120 RIDAP52758 137 aaKnown RBP9.52□□□□□ -0.89
CLIP1-210ENST00000538120 DHODHQ02127 395 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 MFAP5Q13361 173 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ELFN2Q5R3F8 820 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF626Q68DY1 528 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 CFAP77Q6ZQR2 320 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF227Q86WZ6 799 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 GLB1L2Q8IW92 636 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 SPICQ8N5J4 248 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 PSMF1Q92530 271 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 TMEM41AQ96HV5 264 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 SHARPINQ9H0F6 387 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 TCF7L1Q9HCS4 588 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 P4HTMQ9NXG6 502 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 RALGAPA1Q6GYQ0 2036 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 EML6Q6ZMW3 1958 aa9.52□□□□□ -0.89
CLIP1-210ENST00000538120 ANXA2P2A6NMY6 339 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 SULT2B1O00204 365 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 CREBL2O60519 120 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-210ENST00000538120 RAD1O60671 282 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 CSRP1P21291 193 aaKnown RBP9.51□□□□□ -0.89
CLIP1-210ENST00000538120 H3F3AP84243 136 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 KRBOX4Q5JUW0 171 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 THEM4Q5T1C6 240 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 SLC25A47Q6Q0C1 308 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 NOXO1Q8NFA2 376 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 OR4D10Q8NGI6 311 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 OR6X1Q8NH79 312 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 TMEM106AQ96A25 262 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 SLC25A44Q96H78 314 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-210ENST00000538120 JSRP1Q96MG2 331 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-210ENST00000538120 CMTM3Q96MX0 182 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 G6PC2Q9NQR9 355 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 TTLL8A6PVC2 850 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 STMND1H3BQB6 276 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 OR2A4O95047 310 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 PMS2P2O95744 297 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 SERPINA7P05543 415 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 CPN1P15169 458 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 DNASE1L1P49184 302 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 B3GALT5-AS1P59052 145 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 GPR85P60893 370 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 SLC35A1P78382 337 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 DCAF12L2Q5VW00 463 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 TMEM225Q6GV28 225 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 FBXW5Q969U6 566 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 S100A16Q96FQ6 103 aaKnown RBP9.51□□□□□ -0.89
CLIP1-210ENST00000538120 OR2A7Q96R45 310 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 GAL3ST1Q99999 423 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 GINS4Q9BRT9 223 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 CYB5R1Q9UHQ9 305 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 R4GMQ9 66 aa9.51□□□□□ -0.89
CLIP1-210ENST00000538120 FXYD6-FXYD2A0A087WZ82 144 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 CCDC187A0A096LP49 1063 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 MEIS3P1A6NDR6 274 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms