RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 EIF1BO60739 113 aaKnown RBP10.47□□□□□ -0.73
CLIP1-208ENST00000537004 RAF1P04049 648 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 LAP3P28838 519 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 OPRM1P35372 400 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 VWA1Q6PCB0 445 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 CORO6Q6QEF8 472 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 CATSPERDQ86XM0 798 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 CNEP1R1Q8N9A8 125 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 DTX3Q8N9I9 347 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 OR10H5Q8NGA6 315 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 OR10D3Q8NH80 312 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 TSEN15Q8WW01 171 aaKnown RBP10.47□□□□□ -0.73
CLIP1-208ENST00000537004 C11orf40Q8WZ69 217 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 TMEM106AQ96A25 262 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 SPATA2Q9UM82 520 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 CLEC4AQ9UMR7 237 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 V9GY05 133 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 A0A1W2PPL8 197 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 A6NIN4 97 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 GJE1A6NN92 205 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF726A6NNF4 738 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 LINC01387J3KSC0 135 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 CXCL13O43927 109 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 SRSF10O75494 262 aaKnown RBP10.46□□□□□ -0.73
CLIP1-208ENST00000537004 PITPNBP48739 271 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 ASCL1P50553 236 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 CSNK2A1P68400 391 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-208ENST00000537004 HES5Q5TA89 166 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 CELF2-AS1Q8N7Q2 184 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 C19orf18Q8NEA5 215 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 IL17RDQ8NFM7 739 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 LGALS14Q8TCE9 139 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 THRSPQ92748 146 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 PPP1R14AQ96A00 147 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 ADGRG7Q96K78 797 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 NEDD4LQ96PU5 975 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 KCNJ15Q99712 375 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 SLC22A4Q9H015 551 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 C11orf54Q9H0W9 315 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-208ENST00000537004 CRIM1Q9NZV1 1036 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 FBXL3Q9UKT7 428 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 R4GMQ9 66 aa10.46□□□□□ -0.73
CLIP1-208ENST00000537004 RTTNQ86VV8 2226 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 TRAV8-7A0A075B6U6 113 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 IGHV3-15A0A0B4J1V0 119 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 PLA2G10O15496 165 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 TPD52L2O43399 206 aaKnown RBP10.46□□□□□ -0.74
CLIP1-208ENST00000537004 SLC43A1O75387 559 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 ADRA2CP18825 462 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-208ENST00000537004 CLDN17P56750 224 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 HIST3H3Q16695 136 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 SLC25A47Q6Q0C1 308 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 DEGS2Q6QHC5 323 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 LRRTM1Q86UE6 522 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 RNF133Q8WVZ7 376 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 RNASE6Q93091 150 aaKnown RBP10.46□□□□□ -0.74
CLIP1-208ENST00000537004 MCHR2Q969V1 340 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 STARD4Q96DR4 205 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 LURAP1Q96LR2 239 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 NAA11Q9BSU3 229 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-208ENST00000537004 SFXN3Q9BWM7 321 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 SEC61A2Q9H9S3 476 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 RNF122Q9H9V4 155 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 JKAMPQ9P055 326 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 CYB5R1Q9UHQ9 305 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 EMC9Q9Y3B6 208 aa10.46□□□□□ -0.74
CLIP1-208ENST00000537004 TEP1Q99973 2627 aaKnown RBP10.46□□□□□ -0.74
CLIP1-208ENST00000537004 TMEM127O75204 238 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 VAMP5O95183 116 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 IL18BPO95998 194 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 FBXL19-AS1Q494R0 122 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 UBE2NLQ5JXB2 153 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 LINC01560Q8TB33 94 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 NRGNQ92686 78 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 WACQ9BTA9 647 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 EMC7Q9NPA0 242 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 CENPMQ9NSP4 180 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 ANKRD17O75179 2603 aaKnown RBP10.45□□□□□ -0.74
CLIP1-208ENST00000537004 ARPC4-TTLL3A0A0A6YYG9 625 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 ANXA2P2A6NMY6 339 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 RGS13O14921 159 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 MAS1P04201 325 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 ANXA2P07355 339 aaKnown RBP10.45□□□□□ -0.74
CLIP1-208ENST00000537004 QDPRP09417 244 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 H2BFMP0C1H6 154 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 SSTR2P30874 369 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 CDAP32320 146 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 KIR2DL3P43628 341 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 INPP1P49441 399 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 CLDN12P56749 244 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 POU4F3Q15319 338 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 C6orf183Q5T699 404 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 PYHIN1Q6K0P9 492 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 LRFN4Q6PJG9 635 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 CREB3L2Q70SY1 520 aa10.45□□□□□ -0.74
CLIP1-208ENST00000537004 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-208ENST00000537004 DNAAF1Q8NEP3 725 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms