RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MTHFD2LQ9H903 347 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 SLC7A10Q9NS82 523 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 DDX18Q9NVP1 670 aaKnown RBP4.21□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF446Q9NWS9 450 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 NKIRAS2Q9NYR9 191 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 FRAS1Q86XX4 4008 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 STAB2Q8WWQ8 2551 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 TENM2Q9NT68 2774 aa4.21□□□□□ -1.74
CLIP1-207ENST00000536634 SYCE1LA8MT33 242 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 K7EQD1 137 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 SURF4O15260 269 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 KCNK2O95069 426 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NUDT14O95848 222 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 TSPAN8P19075 237 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 SSTR1P30872 391 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 DUTP33316 252 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 MPIP34949 423 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 HSD17B3P37058 310 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 GPR6P46095 362 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 ASMTP46597 345 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 FNTAP49354 379 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 MTCP1P56278 107 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NAAAQ02083 359 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 ZP4Q12836 540 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 PDIA2Q13087 525 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 CAMK2DQ13557 499 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 ZNHIT3Q15649 155 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 DUSP5Q16690 384 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 GGTA1PQ4G0N0 100 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 KRBOX4Q5JUW0 171 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 TSPO2Q5TGU0 170 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 KRT80Q6KB66 452 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 CASP12Q6UXS9 341 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 RAPH1Q70E73 1250 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 KRT74Q7RTS7 529 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 SPATA21Q7Z572 469 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 MISPQ8IVT2 679 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 C17orf78Q8N4C9 275 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 TCEANCQ8N8B7 351 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 DRAXINQ8NBI3 349 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 RHEBL1Q8TAI7 183 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 GPR151Q8TDV0 419 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 GPR119Q8TDV5 335 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 C17orf50Q8WW18 174 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 SELENOMQ8WWX9 145 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 LRRC39Q96DD0 335 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 AMDHD1Q96NU7 426 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 SLC38A2Q96QD8 506 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 OR5B2Q96R09 309 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 CCT8L2Q96SF2 557 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 KATNB1Q9BVA0 655 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 IQCGQ9H095 443 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 RIMS4Q9H426 269 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NTN4Q9HB63 628 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NMRAL1Q9HBL8 299 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 LZTFL1Q9NQ48 299 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF275Q9NSD4 429 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 EMC3Q9P0I2 261 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF225Q9UK10 706 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 MRTO4Q9UKD2 239 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 PCTPQ9UKL6 214 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 BLOC1S6Q9UL45 172 aa4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NOSIPQ9Y314 301 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 NUP214P35658 2090 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
CLIP1-207ENST00000536634 PLXNB1O43157 2135 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 A0A0G2JMP0 313 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 A0A0X1KG70 313 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 LOC100653049A0A140TA62 436 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 GNG14A0A1W2PPG7 69 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 A0A1W2PQD3 144 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 TCRBV9S1A1TA0A576 114 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 FAM159BA6NKW6 160 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 E7ESA3 106 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 G3V4G9 280 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 PIN1P1O15428 100 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 MRPL33O75394 65 aaKnown RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 RP2O75695 350 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 KRT34O76011 436 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 MPZL1O95297 269 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ERCC1P07992 297 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 SELEP16581 610 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 TCN1P20061 433 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 AADACP22760 399 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 TIA1P31483 386 aaKnown RBP eCLIP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 SLC1A3P43003 542 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 P2RX1P51575 399 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 PRPS1P60891 318 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 MYBPC1Q00872 1141 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 DHODHQ02127 395 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 CD300CQ08708 224 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 HEPACAMQ14CZ8 416 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 PDK3Q15120 406 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 QPRTQ15274 297 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 SLC9A3R2Q15599 337 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 ATP6AP1LQ52LC2 224 aa4.19□□□□□ -1.74
CLIP1-207ENST00000536634 LBHQ53QV2 105 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-207ENST00000536634 C3orf33Q6P1S2 294 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms