RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 OR8B4Q96RC9 309 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 OR52E6Q96RD3 313 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 DDOQ99489 341 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SEPHS2Q99611 448 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MGLLQ99685 303 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 KLHDC3Q9BQ90 382 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 TMEM47Q9BQJ4 181 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CBWD1Q9BRT8 395 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 UTP23Q9BRU9 249 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 SLC35A5Q9BS91 424 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 NAA11Q9BSU3 229 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 TAPBPLQ9BX59 468 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CACNG6Q9BXT2 260 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 PKIBQ9C010 78 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CTDSP1Q9GZU7 261 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ARL6Q9H0F7 186 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ARV1Q9H2C2 271 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 DPEP2Q9H4A9 486 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 DHX35Q9H5Z1 703 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 METTL17Q9H7H0 456 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 MEAF6Q9HAF1 191 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 EML4Q9HC35 981 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 CSNK1G1Q9HCP0 422 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 C6orf50Q9HD87 102 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 EXOSC3Q9NQT5 275 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 MMP26Q9NRE1 261 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 UQCC1Q9NVA1 299 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MRPL22Q9NWU5 206 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 C1orf109Q9NX04 203 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MS4A12Q9NXJ0 267 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CNOT2Q9NZN8 540 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 CCDC167Q9P0B6 97 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 DOK5Q9P104 306 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 COMMD3Q9UBI1 195 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 RPS6KB2Q9UBS0 482 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 PRODH2Q9UF12 536 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 HACL1Q9UJ83 578 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF223Q9UK11 482 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 PITPNC1Q9UKF7 332 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 A4GNTQ9UNA3 340 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 PPP1R3CQ9UQK1 317 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CAMK2AQ9UQM7 478 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SLC22A13Q9Y226 551 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 GSTK1Q9Y2Q3 226 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 RBM7Q9Y580 266 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 TIMM10BQ9Y5J6 103 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 FLVCR1Q9Y5Y0 555 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SPIN1Q9Y657 262 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 MRPS18BQ9Y676 258 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF646O15015 1829 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 PCNX3Q9H6A9 2034 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 DIP2CQ9Y2E4 1556 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SCN7AQ01118 1682 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ASTN1O14525 1302 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PAPPAQ13219 1627 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PKD1L3Q7Z443 1732 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 UBR1Q8IWV7 1749 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 DOT1LQ8TEK3 1739 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 hCG_1818297A0A087WSY0 165 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TRAV30A0A087WSZ9 112 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 A0A0A6YYC8 382 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 TGIF2-C20orf24A0A0A6YYL0 155 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 A0A1W2PNV4 684 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TRBC2A0A5B9 178 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NAP1L6A6NFF2 107 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FAM90A20PA6NIJ5 464 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR52A4PA6NMU1 304 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RNF212BA8MTL3 300 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ZNF705EA8MWA4 302 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 F6UZH7 168 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PRAMEF26H0Y7S4 382 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 I3L1I5 382 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 M0R296 226 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CCL25O15444 150 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PRAMEF11O60813 436 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 B3GAT3O94766 335 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TOXO94900 526 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR2F2O95006 317 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CDRT1O95170 752 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SCELO95171 688 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SIX3O95343 332 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PDGFBP01127 241 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PDYNP01213 254 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PTHP01270 115 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TK1P04183 234 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 IL5P05113 134 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 BCHEP06276 602 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FAM86B2P0C5J1 330 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CALCBP10092 127 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GZMBP10144 247 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PIPP12273 146 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 TDGF1P13385 188 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 F3P13726 295 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SRMP19623 302 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TPSB2P20231 275 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MSR1P21757 451 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GPX3P22352 226 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GATA2P23769 480 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 CPT2P23786 658 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms