RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SCRG1O75711 98 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 PNLIPP16233 465 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 GNB3P16520 340 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF20P17024 532 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 HRH1P35367 487 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 P2RY4P51582 365 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 PPP1R1AQ13522 171 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 FAM69BQ5VUD6 431 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 AWAT2Q6E213 333 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 OR52W1Q6IF63 320 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 TDHQ8IZJ6 230 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 SPEM1Q8N4L4 309 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 OR6X1Q8NH79 312 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 NUDCD2Q8WVJ2 157 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 IFT46Q9NQC8 304 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 ATXN7L1Q9ULK2 861 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 KCNK7Q9Y2U2 307 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 HRH3Q9Y5N1 445 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 B3GALT1Q9Y5Z6 326 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 PHF3Q92576 2039 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 ADAMTS20P59510 1910 aa14.22□□□□□ -0.13
CHMP1A-202ENST00000535997 KANTRA0A1W2PQU2 76 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 TIAF1O95411 115 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 ONECUT2O95948 504 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 IFNA6P05013 189 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 CD96P40200 585 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 STARD6P59095 220 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 GABREP78334 506 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 FOXK1P85037 733 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 PGAP1Q75T13 922 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 OR2W3Q7Z3T1 314 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 NOXO1Q8NFA2 376 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 OR10G3Q8NGC4 313 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 PPP1R1CQ8WVI7 109 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 SEC22AQ96IW7 307 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 DNTTIP1Q9H147 329 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 POLR1DQ9Y2S0 133 aa14.21□□□□□ -0.13
CHMP1A-202ENST00000535997 FKBP2P26885 142 aaKnown RBP14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 CASRP41180 1078 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 MFAP5Q13361 173 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 JMJD6Q6NYC1 403 aaPredicted RBP14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM81Q6P7N7 255 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 ACOT7LQ6ZUV0 252 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF101Q8IZC7 436 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 ELP5Q8TE02 316 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 OXGR1Q96P68 337 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM185BQ9H7F4 350 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 COQ3Q9NZJ6 369 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 RARRES3Q9UL19 164 aa14.21□□□□□ -0.14
CHMP1A-202ENST00000535997 ADAMTS9Q9P2N4 1935 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 EFSO43281 561 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 TRAF3IP2O43734 574 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 OR2J2O76002 312 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 SHBQ15464 509 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 FAM189A2Q15884 450 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 KCNMB1Q16558 191 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC22A6Q4U2R8 563 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC25A47Q6Q0C1 308 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 KCNG3Q8TAE7 436 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC22A8Q8TCC7 542 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 SHDQ96IW2 340 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 RASL12Q9NYN1 266 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 LOC100509620A0A075B734 347 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 LOC102725191A0A1B0GVB3 256 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 TPD52L2O43399 206 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 DUS4LO95620 317 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF239Q16600 458 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 HIST3H3Q16695 136 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 PXT1Q8NFP0 134 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 OR2M3Q8NG83 312 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 PHYHIPLQ96FC7 376 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 LPAR5Q9H1C0 372 aa14.2□□□□□ -0.14
CHMP1A-202ENST00000535997 OR2AT4A6NND4 320 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 SSX5O60225 188 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 DCNP07585 359 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 GSTP1P09211 210 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ABOP16442 354 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF43P17038 809 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ADH6P28332 368 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 CDAP32320 146 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 EIF1P41567 113 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 PRKXP51817 358 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 PXDC1Q5TGL8 231 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 GLIPR1L1Q6UWM5 242 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ABHD12BQ7Z5M8 362 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 OR4K15Q8NH41 348 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC25A43Q8WUT9 341 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ST8SIA4Q92187 359 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 OR5B2Q96R09 309 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 VRK1Q99986 396 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 ASH2LQ9UBL3 628 aa14.19□□□□□ -0.14
CHMP1A-202ENST00000535997 A0A1W2PNR3 127 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 LGALS8O00214 317 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 BCL2L11O43521 198 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 OPN1LWP04000 364 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 LIPCP11150 499 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF17P17021 662 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 NAT1P18440 290 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF121P58317 390 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF385CQ66K41 422 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms