RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CD300LGQ6UXG3 332 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 TMEM136Q6ZRR5 245 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 TAS2R42Q7RTR8 314 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 FAM228AQ86W67 206 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 OR4C5Q8NGB2 326 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 NUBPLQ8TB37 319 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 OR51E1Q8TCB6 317 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 ELMO1Q92556 727 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 NRBF2Q96F24 287 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 TMEM165Q9HC07 324 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 MRM3Q9HC36 420 aaKnown RBP1.18□□□□□ -2.22
ATM-220ENST00000533526 MTCH1Q9NZJ7 389 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 SLC17A7Q9P2U7 560 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 ANKRD12Q6UB98 2062 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 TICRRQ7Z2Z1 1910 aa1.18□□□□□ -2.22
ATM-220ENST00000533526 TRBV9A0A0B4J1U6 114 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 A0A1B0GW55 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 NCBP2LA6PVI3 153 aaKnown RBP1.17□□□□□ -2.22
ATM-220ENST00000533526 PRAMEF26H0Y7S4 382 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 AP3B1O00203 1094 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 PLPP1O14494 284 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 OR7C2O60412 319 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 RAD1O60671 282 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 FGFR1OPO95684 399 aaKnown RBP1.17□□□□□ -2.22
ATM-220ENST00000533526 LSM8O95777 96 aaKnown RBP1.17□□□□□ -2.22
ATM-220ENST00000533526 RPN2P04844 631 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4L2P0CJ85 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4L3P0CJ86 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4L5P0CJ88 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4L6P0CJ89 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4L7P0CJ90 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 MYL2P10916 166 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 POLR2IP36954 125 aaKnown RBP1.17□□□□□ -2.22
ATM-220ENST00000533526 TAS2R46P59540 309 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DMC1Q14565 340 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 ZNF266Q14584 549 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 CHRNA6Q15825 494 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 HCP5Q6MZN7 132 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 RTL4Q6ZR62 310 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 SGPP2Q8IWX5 399 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 C19orf18Q8NEA5 215 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 OR1L1Q8NH94 360 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 LYPD6BQ8NI32 183 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 PHOSPHO2Q8TCD6 241 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 CAPSLQ8WWF8 208 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 RASD2Q96D21 266 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 RNF145Q96MT1 663 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 ZFP3Q96NJ6 502 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 GPR82Q96P67 336 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 PLIN2Q99541 437 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 TMEM243Q9BU79 118 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 SLIRPQ9GZT3 109 aaKnown RBP1.17□□□□□ -2.22
ATM-220ENST00000533526 TAS2R1Q9NYW7 299 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 DUX4Q9UBX2 424 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 PITPNC1Q9UKF7 332 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 TMCC3Q9ULS5 477 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 SLC17A4Q9Y2C5 497 aa1.17□□□□□ -2.22
ATM-220ENST00000533526 XKRY2A2RUG3 117 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 GOLGA6L4A6NEF3 574 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 CENPBD1B2RD01 187 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 ZNF878C9JN71 531 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 H7C1H1 209 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 DNALI1O14645 258 aaPredicted RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 HUS1O60921 280 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 FTH1P02794 183 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 HSPD1P10809 573 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 TAGLN2P37802 199 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 MRPL19P49406 292 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 IFITM3Q01628 133 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 KDSRQ06136 332 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 BTN1A1Q13410 526 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 FAM53BQ14153 422 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 IHHQ14623 411 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 MRPL23Q16540 153 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 KRTAP6-3Q3LI67 103 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SP6Q3SY56 376 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 KLHL12Q53G59 568 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 HSP90AB3PQ58FF7 597 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 DEGS2Q6QHC5 323 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SMARCD3Q6STE5 483 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SPESP1Q6UW49 350 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 C12orf54Q6X4T0 127 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 TMPRSS11AQ6ZMR5 421 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SLC22A9Q8IVM8 553 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 STK40Q8N2I9 435 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SLC26A10Q8NG04 563 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 OR5K2Q8NHB8 316 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 AKR7LQ8NHP1 331 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 ZNF606Q8WXB4 792 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 ZBED3Q96IU2 234 aaPredicted RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 COL21A1Q96P44 957 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 TGS1Q96RS0 853 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 SEC22CQ9BRL7 303 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 NUP58Q9BVL2 599 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 ZYG11BQ9C0D3 744 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 SLC39A1Q9NY26 324 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 YARS2Q9Y2Z4 477 aaKnown RBP1.16□□□□□ -2.22
ATM-220ENST00000533526 HES2Q9Y543 173 aa1.16□□□□□ -2.22
ATM-220ENST00000533526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.16□□□□□ -2.22
ATM-220ENST00000533526 ADGRA3Q8IWK6 1321 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms