RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 GPR78Q96P69 363 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FCRL5Q96RD9 977 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 HIST1H2BLQ99880 126 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FAAP24Q9BTP7 215 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ARL6Q9H0F7 186 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 RBKSQ9H477 322 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 MOB1AQ9H8S9 216 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PLEKHA1Q9HB21 404 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 SGK2Q9HBY8 427 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 EXOSC4Q9NPD3 245 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 NOX4Q9NPH5 578 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 TRIM36Q9NQ86 728 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 SLC2A8Q9NY64 477 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PIPOXQ9P0Z9 390 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CACFD1Q9UGQ2 172 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CRLS1Q9UJA2 301 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 JPT1Q9UK76 154 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 HHLA2Q9UM44 414 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 NIP7Q9Y221 180 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-236ENST00000533222 OR51B2Q9Y5P1 312 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 MON2Q7Z3U7 1717 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 UBR1Q8IWV7 1749 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ARFGEF2Q9Y6D5 1785 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PPIAL4EA0A075B759 164 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PPIAL4CA0A0B4J2A2 164 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 LOC285095A0A1B0GVY8 99 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TCRBV9S1A1TA0A576 114 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 OR6C6A6NF89 314 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 GGT3PA6NGU5 568 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 YJEFN3A6XGL0 299 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 IDSB3KWA1 339 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 B4DEV8 164 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PPIAL4DF5H284 164 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 G3V2L1 256 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ACKR2O00590 384 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 BCL2L11O43521 198 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 GSTZ1O43708 216 aaPredicted RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 LANCL1O43813 399 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SLC25A12O75746 678 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ZNF432O94892 652 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 BRI3O95415 125 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 GPR75O95800 540 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TXNDC12O95881 172 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 MT-ND4P03905 459 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ARG1P05089 322 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PPIAL4FP0DN26 164 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ZNF35P13682 527 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ACHEP22303 614 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 IDSP22304 550 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 HRH2P25021 359 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 NMBRP28336 390 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SSTR1P30872 391 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 NTSR1P30989 418 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 STK19P49842 368 aaPredicted RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 PNLIPRP2P54317 469 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 DVL1P1P54792 670 aaPredicted RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 UCP2P55851 309 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 FOXL2P58012 376 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 HERV-K104P63124 156 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 RUNX1Q01196 453 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PAX5Q02548 391 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 FZD2Q14332 565 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 CEBPEQ15744 281 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TMEM41BQ5BJD5 291 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 RAB41Q5JT25 222 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TREML2Q5T2D2 321 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 BCL2L15Q5TBC7 163 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SUSD4Q5VX71 490 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 CST9LP1Q5W188 147 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PLAG1Q6DJT9 500 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SFRP4Q6FHJ7 346 aaPredicted RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 RPL22L1Q6P5R6 122 aaKnown RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 PRSS54Q6PEW0 395 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TOMM20LQ6UXN7 152 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 FRRS1Q6ZNA5 592 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 C15orf39Q6ZRI6 1047 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 RNF44Q7L0R7 432 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 H2BFWTQ7Z2G1 175 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 DPY19L4Q7Z388 723 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PIGZQ86VD9 579 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 CCDC117Q8IWD4 279 aaPredicted RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 GBGT1Q8N5D6 347 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TEX26Q8N6G2 289 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 ACOT4Q8N9L9 421 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 CHST4Q8NCG5 386 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 OR5B3Q8NH48 314 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 GPR119Q8TDV5 335 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SDR42E1Q8WUS8 393 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 MCHR2Q969V1 340 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 TMEM106AQ96A25 262 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PTH2Q96A98 100 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PINX1Q96BK5 328 aaKnown RBP4.88□□□□□ -1.63
CD44-236ENST00000533222 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SIGLEC12Q96PQ1 595 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 PEBP4Q96S96 227 aa4.88□□□□□ -1.63
CD44-236ENST00000533222 SIGMAR1Q99720 223 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms